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Quantification of ortholog losses in insects and vertebrates

Wyder S, Kriventseva EV, Schroder R, Kadowaki T and Zdobnov EM
Genome Biol. 2007 Nov 16;8(11):R242
PMID: 18021399

Evolution of genes and genomes on the Drosophila phylogeny

Drosophila 12 Genomes Consortium (Zdobnov EM)
Nature. 2007 Nov 8;450(7167):203-18.
PMID: 17994087

Biased distributions and decay of long interspersed nuclear elements in the chicken genome.

Abrusán G, Krambeck HJ, Junier T, Giordano J, Warburton PE.
Genetics
PMID: 17947446

New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features

Tapparel C, Junier T, Gerlach D, Cordey S, Van Belle S, Perrin L, Zdobnov EM and Kaiser L
BMC Genomics. 2007 Jul 10; 8(1):224
PMID: 17623054

Evolutionary dynamics of immune-related genes and pathways in disease vector mosquitoes

Waterhouse RM, Kriventseva EV, Meister S, Xi Z, Alvarez KS, Bartholomay LC, Carolina Barillas-Mury C, Bian G, Blandin S, Bruce M. Christensen BM, Dong Y, Jiang H, Kanost MR, Koutsos AC, Levashina EA, Li J, Ligoxygakis P, MacCallum RM, Mayhew GF, Mendes A, Michel K, Osta MA, Paskewitz S, Shin SW, Vlachou D, Wang L, Wei W, Zheng L, Zou Z, Severson DW, Raikhel AS, Kafatos FC, Dimopoulos G, Zdobnov EM George K. Christophides GK
Science. 2007 Jun 22;316(5832):1738-43.
PMID: 17588928

Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster

Koutsos AC, Blass C, Meister S, Schmidt S, Maccallum RM, Soares MB, Collins FH, Benes V, Zdobnov EM, Kafatos FC, Christophides GK
Proc Natl Acad Sci USA. 2007 Jun 11
PMID: 17563388

CsrA of Bacillus subtilis regulates translation initiation of the gene encoding the flagellin protein (hag) by blocking ribosome

Yakhnin H, Pandit P, Petty TJ, Baker CS, Romeo T, Babitzke P
Mol Microbiol. 2007 Jun;64(6):1605-20.
PMID: 17555441

Computational and transcriptional evidence for microRNAs in the honey bee genome

Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
Genome Biol. 2007 Jun 1;8(6):R97
PMID: 17543122

Genome Sequence of Aedes aegypti, a Major Arbovirus Vector

Nene V, Wortman JR, Lawson D, Haas B, Kodira C, Tu ZJ, Loftus B, Xi Z, Megy K, Grabherr M, Ren Q, Zdobnov EM, Lobo NF, Campbell KS, Brown SE, Bonaldo MF, Zhu J, Sinkins SP, Hogenkamp DG, Amedo P, Arsenburger P, Atkinson PW, Bidwell S, Biedler J, Birney E, Bruggner RV, Costas J, Coy MR, Crabtree J, Crawford M, Debruyn B, Decaprio D, Eiglmeier K, Eisenstadt E, El-Dorry H, Gelbart WM, Gomes SL, Hammond M, Hannick LI, Hogan JR, Holmes MH, Jaffe D, Johnston SJ, Kennedy RC, Koo H, Kravitz S, Kriventseva EV, Kulp D, Labutti K, Lee E, Li S, Lovin DD, Mao C, Mauceli E, Menck CF, Miller JR, Montgomery P, Mori A, Nascimento AL, Naveira HF, Nusbaum C, O'leary SB, Orvis J, Pertea M, Quesneville H, Reidenbach KR, Rogers YH, Roth CW, Schneider JR, Schatz M, Shumway M, Stanke M, Stinson EO, Tubio JM, Vanzee JP, Verjovski-Almeida S, Werner D, White O, Wyder S, Zeng Q, Zhao Q, Zhao Y, Hill CA, Raikhel AS, Soares MB, Knudson DL, Lee NH, Galagan J, Salzberg SL, Paulsen IT, Dimopoulos G, Collins FH, Bruce B, Fraser-Liggett CM, Severson DW.
Science. 2007 Jun 22;316(5832):1718-23. Epub 2007 May 17.
PMID: 17510324

Deep metazoan phylogeny

Gerlach D, Wolf M, Dandekar T, Müller T, Pokorny A, Rahmann S
In Silico Biology 7, 0015 (2007)
PMID: 17688440

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Publications by authors:

Zdobnov EM | Wyder S | Waterhouse RM | Kriventseva EV | Junier T | Gerlach D | Rahman N | Vejnar CE | Tegenfeldt FP | Li J | Petty TJ