OrthoDB: Database of Orthologous Groups

Copy-Number Searches
A) Select a radiation node and define your copy-number profile on the tree above then

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Sequence Search

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The Hierarchical Catalog of Eukaryotic Orthologs

OrthoDB presents a catalog of eukaryotic orthologous protein-coding genes across 48 vertebrates, 33 arthropods, 73 fungi, and 12 basal metazoans. Orthology refers to the last common ancestor of the species under consideration, and thus OrthoDB explicitly delineates orthologs at each radiation along the species phylogeny. The database of orthologs presents available protein descriptors, together with Gene Ontology and InterPro attributes, which serve to provide general descriptive annotations of the orthologous groups, and facilitate comprehensive orthology database querying.

Search OrthoDB:   "Cytochrome P450"   protease | peptidase   kinase -serine   FBgn0036816   IPR017981   GO:0006950

For detailed instructions on OrthoDB search functions, data sources, and further information, please see Help. Email support[at]orthodb.org for further help.

OrthoDB 2010: 44 vertebrates, 25 arthropods, 46 fungi, and 5 basal metazoans
OrthoDB 2009: 40 vertebrates, 23 arthropods, and 32 fungi
OrthoDB 2008: 15 vertebrates, 20 arthropods, and 23 fungi

Please Cite:
Waterhouse RM, Zdobnov EM, Tegenfeldt F, Li J, Kriventseva EV.
OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011.
NAR, Jan 2011, PMID:20972218

Email: support[at]orthodb.org

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Creative Commons Licence   This work by E Zdobnov lab is licensed under a Creative Commons Attribution 3.0 Unported License.