gn_a	chr_a	strand_a	loc_a	gn_b	chr_b	strand_b	loc_b	gn_c	chr_c	chr_c	loc_c	synteny_block_ID
Aaeg:AAEL002119-RA	supercont1.49	1	2723755	Agam:ENSANGP00000016959	2R	-1	27888670	Flyb:Ras64B-PA	3L	1	4123350	349
Aaeg:AAEL002124-RA	supercont1.49	-1	2649592	Agam:ENSANGP00000026121	2R	1	27897605	Flyb:CG1299-PA	3L	1	4134138	349
Aaeg:AAEL002112-RA	supercont1.49	1	2594036	Agam:ENSANGP00000016975	2R	-1	27904326	Flyb:nab-PA	3L	-1	4140831	349
Aaeg:AAEL002126-RA	supercont1.49	1	2513803	Agam:ENSANGP00000016743	2R	-1	27937607	Flyb:mas-PB	3L	-1	4147325	349
Aaeg:AAEL002102-RA	supercont1.49	-1	2417373	Agam:ENSANGP00000016852	2R	1	27949350	Flyb:Ero1L-PA	3L	1	4155551	349
Aaeg:AAEL002096-RA	supercont1.49	-1	2387100	Agam:ENSANGP00000016211	2R	1	27951392	Flyb:CG18675-PA	3L	1	4166659	349
Aaeg:AAEL002088-RA	supercont1.49	1	2366097	Agam:ENSANGP00000016751	2R	-1	27956090	Flyb:CG15004-PA	3L	-1	4164205	349
Aaeg:AAEL002131-RA	supercont1.49	1	2351684	Agam:ENSANGP00000016977	2R	-1	27961138	Flyb:CG18676-PA	3L	-1	4167523	349
Aaeg:AAEL002127-RA	supercont1.49	-1	2329834	Agam:ENSANGP00000025756	2R	1	27971162	Flyb:tipE-PA	3L	1	4174954	349
Aaeg:AAEL005977-RA	supercont1.183	1	925617	Agam:ENSANGP00000016465	2L	-1	19605081	Flyb:CG13937-PA	3L	-1	1862513	117
Aaeg:AAEL005976-RA	supercont1.183	-1	860782	Agam:ENSANGP00000016485	2L	1	19627527	Flyb:Aprt-PA	3L	-1	1867942	117
Aaeg:AAEL005980-RA	supercont1.183	-1	777323	Agam:ENSANGP00000016479	2L	1	19638547	Flyb:CG12026-PA	3L	1	1873969	117
Aaeg:AAEL005979-RA	supercont1.183	1	712812	Agam:ENSANGP00000015889	2L	-1	19657496	Flyb:CG1887-PA	3L	-1	1879283	117
Aaeg:AAEL005974-RA	supercont1.183	-1	297164	Agam:ENSANGP00000016468	2L	1	19764341	Flyb:CG12361-PA	3L	1	1912414	117
Aaeg:AAEL002253-RA	supercont1.52	1	3013153	Agam:ENSANGP00000020486	2L	-1	31898932	Flyb:fng-PA	3L	-1	20871693	372
Aaeg:AAEL002265-RA	supercont1.52	-1	1861972	Agam:ENSANGP00000013486	2L	1	32161578	Flyb:CG32432-PA	3L	-1	20796918	372
Aaeg:AAEL002271-RA	supercont1.52	-1	1724583	Agam:ENSANGP00000004286	2L	-1	32193139	Flyb:CSN3-PA	3L	-1	20774237	372
Aaeg:AAEL002248-RA	supercont1.52	1	1740563	Agam:ENSANGP00000013441	2L	1	32196027	Flyb:CG11456-PA	3L	1	20776642	372
Aaeg:AAEL002277-RA	supercont1.52	1	1683136	Agam:ENSANGP00000014053	2L	-1	32206501	Flyb:Pka-R1-PF	3L	1	20767338	372
Aaeg:AAEL004592-RA	supercont1.124	1	1279386	Agam:ENSANGP00000010020	2L	-1	33214337	Flyb:Src64B-PE	3L	-1	4577378	44
Aaeg:AAEL004586-RB	supercont1.124	-1	998772	Agam:ENSANGP00000004321	2L	1	33289979	Flyb:Rpd3-PA	3L	1	4608873	44
Aaeg:AAEL004583-RD	supercont1.124	1	957985	Agam:ENSANGP00000026674	2L	-1	33296860	Flyb:CG32234-PA	3L	-1	4624226	44
Aaeg:AAEL004587-RA	supercont1.124	1	883709	Agam:ENSANGP00000009987	2L	-1	33305866	Flyb:axo-PA	3L	-1	4641518	44
Aaeg:AAEL004600-RA	supercont1.124	-1	33732	Agam:ENSANGP00000009998	2L	1	33506674	Flyb:Gef64C-PA	3L	1	4761256	44
Aaeg:AAEL000327-RA	supercont1.6	-1	862624	Agam:ENSANGP00000026889	2L	-1	34179063	Flyb:Eip78C-PA	3L	1	21179787	406
Aaeg:AAEL000378-RA	supercont1.6	1	833351	Agam:ENSANGP00000011464	2L	-1	34205407	Flyb:Ilk-PA	3L	1	21151843	406
Aaeg:AAEL000362-RA	supercont1.6	-1	792734	Agam:ENSANGP00000011440	2L	1	34213083	Flyb:CG10508-PF	3L	1	21147096	406
Aaeg:AAEL000330-RA	supercont1.6	1	773207	Agam:ENSANGP00000002571	2L	-1	34220349	Flyb:CG12975-PA	3L	-1	21150267	406
Aaeg:AAEL000314-RA	supercont1.6	1	668491	Agam:ENSANGP00000025275	2L	-1	34222338	Flyb:CG10512-PB	3L	1	21140372	406
Aaeg:AAEL002572-RA	supercont1.60	1	39657	Agam:ENSANGP00000018155	2R	1	6974029	Flyb:Mlc2-PB	3R	-1	25999461	409
Aaeg:AAEL002559-RA	supercont1.60	-1	60196	Agam:ENSANGP00000018136	2R	-1	6977479	Flyb:CG31028-PA	3R	-1	25994739	409
Aaeg:AAEL002546-RA	supercont1.60	1	87800	Agam:ENSANGP00000017389	2R	1	6982138	Flyb:CG31030-PA	3R	-1	25991479	409
Aaeg:AAEL002567-RA	supercont1.60	1	352256	Agam:ENSANGP00000018164	2R	1	7004354	Flyb:CG11498-PA	3R	-1	25980347	409
Aaeg:AAEL002553-RA	supercont1.60	-1	404891	Agam:ENSANGP00000017409	2R	-1	7006694	Flyb:CG15529-PA	3R	1	25978320	409
Aaeg:AAEL004013-RA	supercont1.105	1	2046761	Agam:ENSANGP00000022905	2R	1	43185758	Flyb:CG12539-PA	X	-1	14677702	10
Aaeg:AAEL004003-RA	supercont1.105	1	1958460	Agam:ENSANGP00000029545	2R	-1	43209054	Flyb:CG9518-PA	X	-1	14698878	10
Aaeg:AAEL004002-RA	supercont1.105	1	1803395	Agam:ENSANGP00000024305	2R	-1	43237111	Flyb:CG9517-PA	X	-1	14710994	10
Aaeg:AAEL004036-RA	supercont1.105	1	1630770	Agam:ENSANGP00000015188	2R	-1	43280641	Flyb:CG9514-PA	X	-1	14725273	10
Aaeg:AAEL004021-RA	supercont1.105	1	1483361	Agam:ENSANGP00000015190	2R	-1	43307187	Flyb:CG9503-PA	X	-1	14754546	10
Aaeg:AAEL001363-RA	supercont1.31	-1	2010953	Agam:ENSANGP00000010025	2L	1	10370581	Flyb:CG10418-PA	3L	1	12310866	230
Aaeg:AAEL001373-RA	supercont1.31	1	1982924	Agam:ENSANGP00000025696	2L	-1	10382728	Flyb:CG32105-PB	3L	1	12306390	230
Aaeg:AAEL001380-RA	supercont1.31	1	1706884	Agam:ENSANGP00000023278	2L	-1	10445090	Flyb:CG4328-PA	3L	-1	12265947	230
Aaeg:AAEL001367-RA	supercont1.31	1	1623554	Agam:ENSANGP00000010664	2L	-1	10464699	Flyb:CG10426-PA	3L	1	12253792	230
Aaeg:AAEL005321-RA	supercont1.151	-1	2094029	Agam:ENSANGP00000009390	2L	1	47456233	Flyb:Nrx-IV-PB	3L	1	12125493	87
Aaeg:AAEL005315-RA	supercont1.151	1	2069059	Agam:ENSANGP00000011005	2L	-1	47467907	Flyb:CG9760-PB	3L	-1	12132647	87
Aaeg:AAEL005322-RA	supercont1.151	1	1942971	Agam:ENSANGP00000010731	2L	-1	47487221	Flyb:Rh7-PA	3L	-1	12141126	87
Aaeg:AAEL005337-RA	supercont1.151	-1	1427290	Agam:ENSANGP00000011013	2L	1	47534279	Flyb:CAH2-PA	3L	1	12155368	87
Aaeg:AAEL010185-RA	supercont1.458	1	310736	Agam:ENSANGP00000013903	2R	-1	1591414	Flyb:CG17230-PB	3R	1	7290535	327
Aaeg:AAEL010171-RA	supercont1.458	-1	263963	Agam:ENSANGP00000013948	2R	1	1594377	Flyb:PGRP-LB-PA	3R	-1	7279130	327
Aaeg:AAEL010178-RA	supercont1.458	-1	203588	Agam:ENSANGP00000013887	2R	1	1601926	Flyb:CG31374-PA	3R	-1	7265139	327
Aaeg:AAEL010175-RA	supercont1.458	-1	105534	Agam:ENSANGP00000013904	2R	1	1605883	Flyb:CG5281-PA	3R	1	7262422	327
Aaeg:AAEL002771-RA	supercont1.67	1	2831571	Agam:ENSANGP00000018397	2R	-1	10527627	Flyb:Cp190-PB	3R	-1	11098503	437
Aaeg:AAEL002772-RA	supercont1.67	1	2801768	Agam:ENSANGP00000018414	2R	1	10530772	Flyb:MRG15-PA	3R	-1	11103032	437
Aaeg:AAEL002761-RB	supercont1.67	-1	2679843	Agam:ENSANGP00000029360	2R	1	10564734	Flyb:Tm1-PE	3R	1	11121882	437
Aaeg:AAEL002759-RB	supercont1.67	-1	2551295	Agam:ENSANGP00000024231	2R	1	10594260	Flyb:Tm2-PA	3R	1	11139252	437
Aaeg:AAEL005767-RA	supercont1.174	1	558914	Agam:ENSANGP00000012798	2R	-1	22824819	Flyb:Or83a-PA	3R	-1	1224143	110
Aaeg:AAEL005779-RB	supercont1.174	1	522885	Agam:ENSANGP00000012173	2R	-1	22833842	Flyb:CG2663-PB	3R	-1	1227902	110
Aaeg:AAEL005776-RA	supercont1.174	1	401136	Agam:ENSANGP00000012177	2R	-1	22853951	Flyb:Or83b-PA	3R	-1	1234411	110
Aaeg:AAEL005785-RA	supercont1.174	-1	236640	Agam:ENSANGP00000012171	2R	1	22871430	Flyb:CG14669-PA	3R	1	1274641	110
Aaeg:AAEL004008-RA	supercont1.105	-1	1223191	Agam:ENSANGP00000010919	2R	1	30280843	Flyb:nAcRbeta-96A-PA	3R	-1	20337920	9
Aaeg:AAEL004032-RA	supercont1.105	1	1123595	Agam:ENSANGP00000000239	2R	-1	30348269	Flyb:nAcRalpha-96Ab-PB	3R	1	20314201	9
Aaeg:AAEL004006-RA	supercont1.105	-1	707596	Agam:ENSANGP00000010950	2R	1	30472086	Flyb:nAcRalpha-96Aa-PA	3R	-1	20237536	9
Aaeg:AAEL004030-RA	supercont1.105	-1	544331	Agam:ENSANGP00000011108	2R	1	30504747	Flyb:CG17782-PA	3R	-1	20197476	9
Aaeg:AAEL002110-RA	supercont1.49	-1	2099394	Agam:ENSANGP00000015068	2R	-1	37171359	Flyb:CG15007-PA	3L	-1	4194810	348
Aaeg:AAEL002095-RA	supercont1.49	-1	2159314	Agam:ENSANGP00000014940	2R	-1	37200705	Flyb:CG1295-PA	3L	1	4188583	348
Aaeg:AAEL002114-RA	supercont1.49	-1	2031701	Agam:ENSANGP00000029454	2R	-1	37231547	Flyb:CG1332-PA	3L	1	4203144	348
Aaeg:AAEL002111-RA	supercont1.49	-1	2072904	Agam:ENSANGP00000000739	2R	-1	37238222	Flyb:CG15008-PA	3L	-1	4196092	348
Aaeg:AAEL000264-RA	supercont1.5	-1	886149	Agam:ENSANGP00000000545	3L	1	8396227	Flyb:Pld-PA	2R	1	1759619	353
Aaeg:AAEL000263-RA	supercont1.5	-1	256445	Agam:ENSANGP00000030363	3L	1	8591797	Flyb:jing-PA	2R	1	2128552	353
Aaeg:AAEL000301-RA	supercont1.5	-1	187814	Agam:ENSANGP00000016646	3L	1	8609817	Flyb:Trap1-PA	2R	-1	2146695	353
Aaeg:AAEL000291-RA	supercont1.5	-1	131602	Agam:ENSANGP00000027550	3L	1	8616787	Flyb:Vha16-PD	2R	-1	2141605	353
Aaeg:AAEL000770-RA	supercont1.16	-1	3845979	Agam:ENSANGP00000021164	3L	1	34041641	Flyb:Lis-1-PA	2R	1	11697726	96
Aaeg:AAEL000785-RA	supercont1.16	1	3822859	Agam:ENSANGP00000021234	3L	-1	34046696	Flyb:CG8441-PA	2R	-1	11700439	96
Aaeg:AAEL000794-RA	supercont1.16	-1	3791640	Agam:ENSANGP00000021183	3L	1	34056296	Flyb:CG8443-PA	2R	1	11704856	96
Aaeg:AAEL000787-RA	supercont1.16	1	3765761	Agam:ENSANGP00000008782	3L	1	34062668	Flyb:CG8445-PA	2R	-1	11710036	96
Aaeg:AAEL001876-RA	supercont1.44	-1	1807078	Agam:ENSANGP00000012367	3R	-1	3799440	Flyb:dpp-PA	2L	1	2456814	310
Aaeg:AAEL001870-RA	supercont1.44	-1	2008589	Agam:ENSANGP00000012350	3R	-1	3825735	Flyb:CG9886-PA	2L	1	2421654	310
Aaeg:AAEL001837-RA	supercont1.44	1	2036681	Agam:ENSANGP00000011836	3R	1	3841577	Flyb:CG31684-PA	2L	-1	2418372	310
Aaeg:AAEL001867-RA	supercont1.44	-1	2162614	Agam:ENSANGP00000011785	3R	-1	3852616	Flyb:VGlut-PA	2L	1	2404970	310
Aaeg:AAEL001791-RA	supercont1.43	1	966985	Agam:ENSANGP00000019558	3R	-1	10314513	Flyb:CG10283-PA	2L	-1	18474524	304
Aaeg:AAEL001817-RA	supercont1.43	-1	890993	Agam:ENSANGP00000019692	3R	1	10329268	Flyb:CG10176-PA	2L	1	18482510	304
Aaeg:AAEL001803-RA	supercont1.43	1	877255	Agam:ENSANGP00000006638	3R	-1	10334964	Flyb:CG10275-PA	2L	-1	18488180	304
Aaeg:AAEL001804-RA	supercont1.43	-1	805562	Agam:ENSANGP00000025468	3R	1	10351908	Flyb:CG10178-PA	2L	1	18508407	304
Aaeg:AAEL003254-RA	supercont1.82	1	471790	Agam:ENSANGP00000014807	3R	-1	44590850	Flyb:CG8520-PA	2R	1	7940386	486
Aaeg:AAEL003216-RA	supercont1.82	-1	413646	Agam:ENSANGP00000014863	3R	-1	44596316	Flyb:CG8515-PA	2R	1	7930363	486
Aaeg:AAEL003221-RA	supercont1.82	-1	366478	Agam:ENSANGP00000031508	3R	1	44603947	Flyb:CG8510-PA	2R	1	7922129	486
Aaeg:AAEL003235-RA	supercont1.82	1	189353	Agam:ENSANGP00000023169	3R	-1	44648230	Flyb:CG30042-PA	2R	1	7894804	486
Aaeg:AAEL008558-RA	supercont1.332	1	217092	Agam:ENSANGP00000013064	2L	1	4154963	Flyb:BBS4-PA	2R	1	6653500	246
Aaeg:AAEL008566-RA	supercont1.332	-1	326757	Agam:ENSANGP00000001269	2L	-1	4165524	Flyb:CG13229-PA	2R	-1	6657388	246
Aaeg:AAEL008562-RA	supercont1.332	-1	399213	Agam:ENSANGP00000031680	2L	-1	4184973	Flyb:CG12391-PA	2R	-1	6664759	246
Aaeg:AAEL000227-RA	supercont1.4	-1	4920198	Agam:ENSANGP00000012643	2L	1	4399056	Flyb:CG3829-PA	2R	1	20496853	294
Aaeg:AAEL000256-RA	supercont1.4	-1	4789923	Agam:ENSANGP00000012656	2L	1	4420152	Flyb:emp-PB	2R	-1	20488478	294
Aaeg:AAEL000234-RA	supercont1.4	-1	4721323	Agam:ENSANGP00000012652	2L	1	4435953	Flyb:CG2736-PA	2R	-1	20482005	294
Aaeg:AAEL004177-RA	supercont1.109	1	341693	Agam:ENSANGP00000025555	2L	1	4973580	Flyb:CG6761-PA	3L	-1	9676096	21
Aaeg:AAEL004152-RA	supercont1.109	-1	372680	Agam:ENSANGP00000023498	2L	-1	4976420	Flyb:UbcD4-PA	3L	1	9673156	21
Aaeg:AAEL004178-RB	supercont1.109	1	398334	Agam:ENSANGP00000013157	2L	1	4982109	Flyb:CG6767-PA	3L	-1	9663356	21
Aaeg:AAEL006308-RA	supercont1.200	1	203771	Agam:ENSANGP00000003663	2L	-1	11371534	Flyb:CG8726-PB	2R	-1	3482313	134
Aaeg:AAEL006311-RA	supercont1.200	1	189523	Agam:ENSANGP00000015675	2L	-1	11377198	Flyb:Nup44A-PC	2R	1	3502405	134
Aaeg:AAEL006307-RA	supercont1.200	-1	150006	Agam:ENSANGP00000015662	2L	1	11396704	Flyb:CG11198-PB	2R	-1	3491625	134
Aaeg:AAEL006282-RA	supercont1.198	-1	725157	Agam:ENSANGP00000015875	2L	-1	12652023	Flyb:Tsp47F-PA	2R	-1	6893945	128
Aaeg:AAEL006271-RD	supercont1.198	-1	763137	Agam:ENSANGP00000015824	2L	-1	12658882	Flyb:CG9027-PC	2R	-1	6897859	128
Aaeg:AAEL006269-RA	supercont1.198	-1	819185	Agam:ENSANGP00000015881	2L	-1	12667539	Flyb:sprt-PA	2R	-1	6904013	128
Aaeg:AAEL003260-RA	supercont1.82	1	2155561	Agam:ENSANGP00000027552	2L	-1	13555864	Flyb:CG14843-PA	3R	1	10246863	487
Aaeg:AAEL003220-RA	supercont1.82	-1	2090578	Agam:ENSANGP00000003619	2L	1	13576459	Flyb:RhoGAP88C-PA	3R	-1	10224670	487
Aaeg:AAEL003277-RA	supercont1.82	1	2056371	Agam:ENSANGP00000019646	2L	-1	13594389	Flyb:NK7.1-PA	3R	-1	10163420	487
Aaeg:AAEL009735-RA	supercont1.422	-1	72836	Agam:ENSANGP00000014321	2L	1	15467127	Flyb:CG6279-PA	3L	-1	11068689	302
Aaeg:AAEL009734-RA	supercont1.422	-1	88984	Agam:ENSANGP00000014284	2L	-1	15468873	Flyb:CG6272-PA	3L	-1	11071824	302
Aaeg:AAEL009738-RA	supercont1.422	1	107312	Agam:ENSANGP00000014065	2L	1	15471390	Flyb:CG7839-PA	3L	1	11050695	302
Aaeg:AAEL010966-RA	supercont1.527	1	521958	Agam:ENSANGP00000021708	2L	-1	16855419	Flyb:Uch-L3-PA	3L	-1	9450269	376
Aaeg:AAEL010971-RA	supercont1.527	-1	483021	Agam:ENSANGP00000021158	2L	1	16866354	Flyb:CG3654-PD	3L	1	9455495	376
Aaeg:AAEL010968-RA	supercont1.527	-1	533461	Agam:ENSANGP00000021214	2L	-1	16873065	Flyb:CG3434-PA	3L	-1	9434008	376
Aaeg:AAEL004860-RA	supercont1.132	-1	1324677	Agam:ENSANGP00000017645	2L	-1	17920594	Flyb:CG32068-PA	3L	1	10637893	60
Aaeg:AAEL004833-RA	supercont1.132	-1	1222981	Agam:ENSANGP00000018302	2L	1	17933381	Flyb:CG33493-PA	3L	-1	10666917	60
Aaeg:AAEL004829-RA	supercont1.132	1	1222421	Agam:ENSANGP00000017869	2L	-1	17934173	Flyb:CG6463-PA	3L	-1	10667614	60
Aaeg:AAEL009235-RA	supercont1.383	1	924432	Agam:ENSANGP00000021794	2L	-1	18132372	Flyb:CG9705-PA	3L	1	16746505	282
Aaeg:AAEL009242-RA	supercont1.383	-1	861549	Agam:ENSANGP00000021894	2L	1	18167481	Flyb:CG13025-PA	3L	-1	16743798	282
Aaeg:AAEL009240-RA	supercont1.383	1	819145	Agam:ENSANGP00000021899	2L	-1	18173301	Flyb:Nrt-PA	3L	1	16740316	282
Aaeg:AAEL003055-RA	supercont1.76	1	1471529	Agam:ENSANGP00000018633	2L	1	19971170	Flyb:CG5989-PA	3L	-1	8577204	466
Aaeg:AAEL003052-RA	supercont1.76	-1	1391100	Agam:ENSANGP00000013849	2L	1	20012943	Flyb:CG6282-PB	3L	1	8586733	466
Aaeg:AAEL003059-RA	supercont1.76	1	1325783	Agam:ENSANGP00000018717	2L	-1	20031606	Flyb:CG5978-PA	3L	-1	8596957	466
Aaeg:AAEL005173-RA	supercont1.145	-1	1436366	Agam:ENSANGP00000017401	2L	-1	22430565	Flyb:Vha44-PD	2R	-1	11844553	75
Aaeg:AAEL005188-RA	supercont1.145	1	1470152	Agam:ENSANGP00000017383	2L	1	22437152	Flyb:CG7997-PB	2R	-1	11857152	75
Aaeg:AAEL005201-RA	supercont1.145	-1	1488404	Agam:ENSANGP00000017491	2L	-1	22441988	Flyb:Hmgs-PB	2R	1	11855040	75
Aaeg:AAEL001374-RA	supercont1.31	1	176690	Agam:ENSANGP00000013556	2L	1	23119467	Flyb:CG32392-PB	3L	-1	6732859	228
Aaeg:AAEL001372-RB	supercont1.31	-1	217186	Agam:ENSANGP00000004517	2L	-1	23125133	Flyb:CG10107-PC	3L	-1	6721984	228
Aaeg:AAEL001385-RA	supercont1.31	-1	277942	Agam:ENSANGP00000013507	2L	-1	23133787	Flyb:CG10103-PA	3L	-1	6729288	228
Aaeg:AAEL001734-RA	supercont1.41	-1	291016	Agam:ENSANGP00000028969	2L	-1	24715916	Flyb:bab1-PB	3L	-1	1053012	299
Aaeg:AAEL001739-RA	supercont1.41	-1	800055	Agam:ENSANGP00000010806	2L	-1	24844033	Flyb:bab2-PA	3L	-1	1141766	299
Aaeg:AAEL001744-RA	supercont1.41	1	1231095	Agam:ENSANGP00000010743	2L	1	24923807	Flyb:Aplip1-PB	3L	1	1181115	299
Aaeg:AAEL006561-RA	supercont1.210	1	1000917	Agam:ENSANGP00000012413	2L	-1	25470301	Flyb:CG7991-PA	3L	1	1697047	147
Aaeg:AAEL006540-RA	supercont1.210	1	664386	Agam:ENSANGP00000012464	2L	1	25514928	Flyb:RabX5-PA	3L	-1	1653043	147
Aaeg:AAEL006538-RA	supercont1.210	1	443463	Agam:ENSANGP00000012562	2L	-1	25547516	Flyb:CG7970-PA	3L	1	1637044	147
Aaeg:AAEL001440-RA	supercont1.33	1	2696832	Agam:ENSANGP00000017802	2L	1	27455673	Flyb:dom-PA	2R	1	16840244	244
Aaeg:AAEL001444-RA	supercont1.33	-1	2749435	Agam:ENSANGP00000017052	2L	-1	27473814	Flyb:CG15666-PA	2R	1	16851093	244
Aaeg:AAEL001450-RA	supercont1.33	1	3188912	Agam:ENSANGP00000017087	2L	1	27571405	Flyb:cv-2-PA	2R	-1	16869008	244
Aaeg:AAEL003112-RA	supercont1.78	-1	2263069	Agam:ENSANGP00000026302	2L	-1	28744764	Flyb:CG32029-PA	3L	1	8615926	470
Aaeg:AAEL003116-RA	supercont1.78	-1	2394623	Agam:ENSANGP00000020628	2L	-1	28772837	Flyb:Arr2-PA	3L	-1	8622106	470
Aaeg:AAEL003117-RA	supercont1.78	1	2452399	Agam:ENSANGP00000020634	2L	1	28785022	Flyb:CG6486-PA	3L	1	8624077	470
Aaeg:AAEL011180-RA	supercont1.548	1	92126	Agam:ENSANGP00000021011	2L	1	31085287	Flyb:CG13321-PA	2R	1	8470271	383
Aaeg:AAEL011179-RA	supercont1.548	-1	411630	Agam:ENSANGP00000020431	2L	-1	31164117	Flyb:Su(z)2-PA	2R	1	8517761	383
Aaeg:AAEL011178-RA	supercont1.548	1	710713	Agam:ENSANGP00000031623	2L	1	31286919	Flyb:Psc-PA	2R	-1	8488249	383
Aaeg:AAEL012091-RA	supercont1.655	-1	259979	Agam:ENSANGP00000002626	2L	1	35534791	Flyb:dve-PB	2R	1	17785728	433
Aaeg:AAEL012093-RA	supercont1.655	-1	157835	Agam:ENSANGP00000011337	2L	1	35559008	Flyb:CG5819-PB	2R	1	17802970	433
Aaeg:AAEL012092-RA	supercont1.655	1	129780	Agam:ENSANGP00000011339	2L	-1	35565217	Flyb:wdp-PD	2R	-1	17807506	433
Aaeg:AAEL000738-RA	supercont1.15	1	858480	Agam:ENSANGP00000011323	2L	1	35708172	Flyb:rogdi-PB	3L	1	17017304	83
Aaeg:AAEL000733-RA	supercont1.15	-1	961886	Agam:ENSANGP00000011344	2L	1	35733578	Flyb:CG7724-PA	3L	1	17022979	83
Aaeg:AAEL000729-RA	supercont1.15	-1	1604140	Agam:ENSANGP00000011317	2L	-1	35845429	Flyb:CG32169-PA	3L	-1	17116381	83
Aaeg:AAEL009864-RA	supercont1.433	1	707124	Agam:ENSANGP00000021441	2L	-1	41854151	Flyb:pio-PB	2R	1	20100458	305
Aaeg:AAEL009858-RA	supercont1.433	-1	287747	Agam:ENSANGP00000023680	2L	1	41905349	Flyb:IFa-PA	2R	-1	20085422	305
Aaeg:AAEL009857-RA	supercont1.433	1	256567	Agam:ENSANGP00000021448	2L	-1	41908132	Flyb:Start1-PB	2R	1	20083724	305
Aaeg:AAEL004248-RA	supercont1.112	-1	403490	Agam:ENSANGP00000015903	2L	1	44607721	Flyb:CG7646-PB	3L	1	19929463	26
Aaeg:AAEL004269-RA	supercont1.112	-1	293387	Agam:ENSANGP00000015900	2L	1	44623812	Flyb:Nca-PA	3L	1	19930938	26
Aaeg:AAEL004249-RB	supercont1.112	1	218243	Agam:ENSANGP00000016640	2L	-1	44640092	Flyb:fln-PA	3L	-1	19924134	26
Aaeg:AAEL003462-RA	supercont1.87	-1	2167893	Agam:ENSANGP00000015928	2L	-1	45102630	Flyb:Tdc1-PA	2R	-1	2190557	506
Aaeg:AAEL003455-RA	supercont1.87	1	2369761	Agam:ENSANGP00000016002	2L	1	45127126	Flyb:CG9422-PC	2R	1	2203923	506
Aaeg:AAEL003454-RA	supercont1.87	1	2393904	Agam:ENSANGP00000023372	2L	-1	45130142	Flyb:CG3403-PA	2R	-1	2207811	506
Aaeg:AAEL010329-RA	supercont1.471	1	301907	Agam:ENSANGP00000028713	2L	1	45185190	Flyb:CG15235-PA	2R	-1	2304428	335
Aaeg:AAEL010328-RA	supercont1.471	1	683099	Agam:ENSANGP00000009529	2L	1	45237439	Flyb:Epac-PA	2R	-1	2277810	335
Aaeg:AAEL010330-RA	supercont1.471	-1	885863	Agam:ENSANGP00000024398	2L	1	45257959	Flyb:SdhB-PA	2R	1	2320177	335
Aaeg:AAEL010108-RA	supercont1.453	-1	544651	Agam:ENSANGP00000009480	2L	1	46207702	Flyb:CG9025-PB	2R	-1	16179112	322
Aaeg:AAEL010111-RA	supercont1.453	1	448285	Agam:ENSANGP00000018422	2L	-1	46222415	Flyb:CG11136-PA	2R	1	16173735	322
Aaeg:AAEL010107-RA	supercont1.453	-1	288574	Agam:ENSANGP00000017895	2L	-1	46252912	Flyb:DMAP1-PA	2R	1	16159806	322
Aaeg:AAEL009211-RA	supercont1.380	-1	161895	Agam:ENSANGP00000009454	2L	1	46707851	Flyb:BBS1-PA	3L	1	7100852	281
Aaeg:AAEL009214-RA	supercont1.380	1	136814	Agam:ENSANGP00000019171	2L	1	46712636	Flyb:Dbi-PB	3L	1	7106962	281
Aaeg:AAEL009213-RA	supercont1.380	-1	87172	Agam:ENSANGP00000009452	2L	1	46746454	Flyb:melt-PB	3L	1	7114924	281
Aaeg:AAEL006895-RA	supercont1.225	-1	206882	Agam:ENSANGP00000025715	2L	-1	48597479	Flyb:Pfk-PB	2R	1	5625963	167
Aaeg:AAEL006895-RA	supercont1.225	-1	206882	Agam:ENSANGP00000025715	2L	-1	48597479	Flyb:Pfk-PB	3L	1	3144485	167
Aaeg:AAEL006885-RA	supercont1.225	-1	252146	Agam:ENSANGP00000029364	2L	-1	48611147	Flyb:14-3-3zeta-PI	2R	1	5617796	167
Aaeg:AAEL006887-RA	supercont1.225	1	289138	Agam:ENSANGP00000021519	2L	1	48629313	Flyb:CG1381-PA	2R	-1	5610853	167
Aaeg:AAEL006888-RA	supercont1.225	-1	317965	Agam:ENSANGP00000026015	2L	-1	48632785	Flyb:CG15080-PA	2R	1	14306589	168
Aaeg:AAEL006881-RA	supercont1.225	-1	590209	Agam:ENSANGP00000027424	2L	-1	48667797	Flyb:CG33146-PA	2R	1	14287526	168
Aaeg:AAEL006893-RA	supercont1.225	-1	611511	Agam:ENSANGP00000009309	2L	-1	48670459	Flyb:CG33148-PB	2R	1	14284208	168
Aaeg:AAEL005484-RA	supercont1.159	1	1536316	Agam:ENSANGP00000027258	2R	1	290467	Flyb:CG32758-PA	X	-1	5574764	94
Aaeg:AAEL005481-RA	supercont1.159	1	1632861	Agam:ENSANGP00000011992	2R	1	303643	Flyb:CG33080-PA	X	-1	5558549	94
Aaeg:AAEL005485-RA	supercont1.159	-1	1729462	Agam:ENSANGP00000004160	2R	-1	312212	Flyb:CG4096-PA	X	1	5551050	94
Aaeg:AAEL011651-RA	supercont1.599	1	645271	Agam:ENSANGP00000009830	2R	1	2090086	Flyb:CG14230-PA	X	1	19539312	405
Aaeg:AAEL011654-RA	supercont1.599	1	575403	Agam:ENSANGP00000013870	2R	-1	2103923	Flyb:CG12531-PA	X	1	19558298	405
Aaeg:AAEL011650-RA	supercont1.599	-1	387614	Agam:ENSANGP00000013886	2R	1	2128631	Flyb:Bap-PA	3R	1	17215370	405
Aaeg:AAEL011650-RA	supercont1.599	-1	387614	Agam:ENSANGP00000013886	2R	1	2128631	Flyb:Bap-PA	3R	1	17215370	405
Aaeg:AAEL011650-RA	supercont1.599	-1	387614	Agam:ENSANGP00000013886	2R	1	2128631	Flyb:Bap-PA	X	1	19566750	405
Aaeg:AAEL011650-RA	supercont1.599	-1	387614	Agam:ENSANGP00000013886	2R	1	2128631	Flyb:Bap-PA	X	1	19566750	405
Aaeg:AAEL002997-RA	supercont1.74	-1	929979	Agam:ENSANGP00000015747	2R	1	4842028	Flyb:CG7432-PA	3R	1	15494900	455
Aaeg:AAEL003003-RA	supercont1.74	1	861860	Agam:ENSANGP00000009685	2R	-1	4860263	Flyb:GluClalpha-PA	3R	1	15585852	455
Aaeg:AAEL002995-RA	supercont1.74	1	520419	Agam:ENSANGP00000015741	2R	-1	4960526	Flyb:CG31216-PA	3R	1	15518418	455
Aaeg:AAEL008660-RA	supercont1.339	-1	776397	Agam:ENSANGP00000022655	2R	1	5224928	Flyb:Fer1-PA	3R	1	2965175	250
Aaeg:AAEL008651-RA	supercont1.339	-1	756339	Agam:ENSANGP00000011488	2R	1	5230263	Flyb:CG31248-PA	3R	1	2955924	250
Aaeg:AAEL008653-RA	supercont1.339	-1	730266	Agam:ENSANGP00000011527	2R	1	5232999	Flyb:CG10068-PA	3R	-1	2953020	250
Aaeg:AAEL007283-RA	supercont1.247	-1	751928	Agam:ENSANGP00000011599	2R	-1	5367424	Flyb:CG6432-PA	3R	1	20164271	191
Aaeg:AAEL007294-RA	supercont1.247	-1	703966	Agam:ENSANGP00000011771	2R	1	5372152	Flyb:Dms-PA	3R	1	20168732	191
Aaeg:AAEL007310-RA	supercont1.247	1	663695	Agam:ENSANGP00000009655	2R	1	5375870	Flyb:CG6454-PB	3R	1	20178263	191
Aaeg:AAEL012212-RA	supercont1.666	1	243431	Agam:ENSANGP00000008615	2R	-1	6316167	Flyb:CG18437-PA	3R	1	23495730	434
Aaeg:AAEL012207-RD	supercont1.666	-1	135637	Agam:ENSANGP00000023757	2R	1	6334530	Flyb:Mlc1-PA	3R	-1	23484735	434
Aaeg:AAEL012206-RA	supercont1.666	-1	63391	Agam:ENSANGP00000018159	2R	1	6349734	Flyb:tau-PA	3R	-1	23474665	434
Aaeg:AAEL009380-RC	supercont1.393	1	487068	Agam:ENSANGP00000007901	2R	1	12658577	Flyb:norpA-PB	X	1	4200956	289
Aaeg:AAEL009379-RA	supercont1.393	-1	578360	Agam:ENSANGP00000019125	2R	-1	12670738	Flyb:mRpL33-PA	X	-1	4167213	289
Aaeg:AAEL009382-RA	supercont1.393	1	584951	Agam:ENSANGP00000030195	2R	1	12673254	Flyb:CG2982-PA	X	1	4165844	289
Aaeg:AAEL013326-RA	supercont1.823	-1	67542	Agam:ENSANGP00000018364	2R	-1	13125302	Flyb:CG14661-PA	3R	-1	779730	489
Aaeg:AAEL013323-RA	supercont1.823	-1	143256	Agam:ENSANGP00000019095	2R	-1	13134338	Flyb:CG2016-PB	3R	-1	784738	489
Aaeg:AAEL013327-RA	supercont1.823	-1	189289	Agam:ENSANGP00000018441	2R	-1	13141965	Flyb:CG1124-PA	3R	1	792637	489
Aaeg:AAEL006056-RA	supercont1.187	1	151823	Agam:ENSANGP00000027105	2R	1	13188589	Flyb:CG4673-PA	3R	-1	21443158	119
Aaeg:AAEL006054-RA	supercont1.187	-1	147916	Agam:ENSANGP00000018314	2R	-1	13196375	Flyb:CG5071-PA	3R	1	21444996	119
Aaeg:AAEL006057-RA	supercont1.187	-1	316197	Agam:ENSANGP00000011319	2R	-1	13235436	Flyb:msi-PA	3L	-1	17721164	119
Aaeg:AAEL006057-RA	supercont1.187	-1	316197	Agam:ENSANGP00000011319	2R	-1	13235436	Flyb:msi-PA	3R	1	21423576	119
Aaeg:AAEL007127-RA	supercont1.238	-1	1637006	Agam:ENSANGP00000007849	2R	1	13930198	Flyb:CG13708-PA	3L	-1	4811931	179
Aaeg:AAEL007130-RA	supercont1.238	1	1618711	Agam:ENSANGP00000011245	2R	-1	13933059	Flyb:Aats-leu-PA	3L	1	4808186	179
Aaeg:AAEL007132-RA	supercont1.238	-1	1557155	Agam:ENSANGP00000022463	2R	1	13946265	Flyb:Dhc64C-PB	3L	-1	4800014	179
Aaeg:AAEL010048-RA	supercont1.449	-1	111468	Agam:ENSANGP00000019902	2R	1	14716776	Flyb:Rpn7-PA	3R	-1	18287061	316
Aaeg:AAEL010053-RA	supercont1.449	1	164200	Agam:ENSANGP00000019247	2R	1	14724286	Flyb:CG13848-PA	3R	-1	18249866	316
Aaeg:AAEL010046-RB	supercont1.449	-1	202572	Agam:ENSANGP00000019898	2R	-1	14727310	Flyb:mats-PA	3R	1	18247852	316
Aaeg:AAEL010062-RA	supercont1.450	-1	754523	Agam:ENSANGP00000013458	2R	1	17195523	Flyb:CG5644-PA	3L	-1	8952499	320
Aaeg:AAEL010059-RA	supercont1.450	1	720115	Agam:ENSANGP00000013543	2R	-1	17199790	Flyb:CG5651-PB	3L	-1	8947288	320
Aaeg:AAEL010060-RA	supercont1.450	-1	703518	Agam:ENSANGP00000013416	2R	1	17203301	Flyb:CG5064-PA	3L	1	8950088	320
Aaeg:AAEL010462-RA	supercont1.479	1	84573	Agam:ENSANGP00000001263	2R	1	20737211	Flyb:VAChT-PA	3R	1	14539398	338
Aaeg:AAEL010471-RA	supercont1.479	1	159828	Agam:ENSANGP00000001265	2R	1	20756555	Flyb:Cha-PA	3R	1	14544148	338
Aaeg:AAEL010466-RA	supercont1.479	-1	187697	Agam:ENSANGP00000014818	2R	-1	20763989	Flyb:Mekk1-PA	3R	-1	14563980	338
Aaeg:AAEL002803-RA	supercont1.68	-1	2259905	Agam:ENSANGP00000029405	2R	1	20924714	Flyb:CG14686-PA	3R	1	6605931	443
Aaeg:AAEL002776-RA	supercont1.68	-1	2196416	Agam:ENSANGP00000014848	2R	1	20943331	Flyb:fau-PA	3R	-1	6598457	443
Aaeg:AAEL002783-RA	supercont1.68	-1	2357401	Agam:ENSANGP00000014298	2R	-1	20953619	Flyb:mRpL37-PA	3R	-1	6608324	443
Aaeg:AAEL006843-RA	supercont1.223	-1	269590	Agam:ENSANGP00000025594	2R	-1	22180768	Flyb:CG7139-PB	3L	-1	22002949	166
Aaeg:AAEL006834-RA	supercont1.223	1	390290	Agam:ENSANGP00000021964	2R	-1	22186624	Flyb:CG7470-PA	3L	1	21911111	166
Aaeg:AAEL006844-RA	supercont1.223	-1	554705	Agam:ENSANGP00000003015	2R	-1	22205342	Flyb:TyrR-PA	3L	1	21996417	166
Aaeg:AAEL007641-RA	supercont1.270	-1	676006	Agam:ENSANGP00000002750	2R	1	25553968	Flyb:CG13661-PA	3R	-1	20996858	205
Aaeg:AAEL007646-RA	supercont1.270	1	631750	Agam:ENSANGP00000010755	2R	-1	25560766	Flyb:CG11848-PA	3R	1	20959846	205
Aaeg:AAEL007639-RA	supercont1.270	-1	354212	Agam:ENSANGP00000010817	2R	-1	25599736	Flyb:CG11847-PA	3R	1	20955148	205
Aaeg:AAEL001047-RA	supercont1.21	1	3346423	Agam:ENSANGP00000024908	2R	-1	30872375	Flyb:CG32158-PC	3L	-1	16458907	146
Aaeg:AAEL001019-RA	supercont1.21	-1	2695422	Agam:ENSANGP00000017548	2R	-1	30974213	Flyb:CG33158-PB	3L	1	16421003	146
Aaeg:AAEL001044-RA	supercont1.21	-1	2616060	Agam:ENSANGP00000018288	2R	-1	30976984	Flyb:Aats-tyr-PA	3L	-1	16383623	146
Aaeg:AAEL002962-RA	supercont1.73	1	925369	Agam:ENSANGP00000013640	2R	1	38017461	Flyb:Osi14-PA	3R	1	2125634	453
Aaeg:AAEL002966-RA	supercont1.73	1	1155975	Agam:ENSANGP00000000807	2R	1	38049672	Flyb:Osi17-PA	3R	1	2147062	453
Aaeg:AAEL002965-RA	supercont1.73	-1	1259406	Agam:ENSANGP00000014367	2R	-1	38057848	Flyb:Osi18-PA	3R	1	2156677	453
Aaeg:AAEL007509-RA	supercont1.260	-1	634246	Agam:ENSANGP00000019754	2R	-1	38775388	Flyb:CG9779-PA	3R	-1	136125	201
Aaeg:AAEL007512-RA	supercont1.260	1	646815	Agam:ENSANGP00000003866	2R	1	38781200	Flyb:CG9791-PA	3R	1	138675	201
Aaeg:AAEL007518-RA	supercont1.260	-1	695491	Agam:ENSANGP00000022990	2R	-1	38810877	Flyb:cpx-PK	3R	1	122122	201
Aaeg:AAEL001014-RA	supercont1.21	1	2243584	Agam:ENSANGP00000014333	2R	1	47468081	Flyb:CG8228-PA	3R	1	5390665	145
Aaeg:AAEL001039-RA	supercont1.21	-1	2267508	Agam:ENSANGP00000014380	2R	-1	47471183	Flyb:CG9393-PA	3R	-1	5388448	145
Aaeg:AAEL001033-RA	supercont1.21	1	2301732	Agam:ENSANGP00000023168	2R	1	47472901	Flyb:MBD-like-PB	3R	1	5386347	145
Aaeg:AAEL003183-RA	supercont1.81	1	2376856	Agam:ENSANGP00000020359	2R	1	49767594	Flyb:CG7077-PA	3R	1	18179948	484
Aaeg:AAEL003192-RA	supercont1.81	1	2362298	Agam:ENSANGP00000020394	2R	-1	49771934	Flyb:CG7084-PA	3R	1	18127720	484
Aaeg:AAEL003199-RA	supercont1.81	-1	1363377	Agam:ENSANGP00000020309	2R	1	49921798	Flyb:CG31163-PB	3R	1	18059855	484
Aaeg:AAEL010623-RA	supercont1.491	-1	231977	Agam:ENSANGP00000020344	2R	1	50398948	Flyb:Osi2-PB	3R	1	2038142	350
Aaeg:AAEL010624-RA	supercont1.491	-1	145420	Agam:ENSANGP00000020364	2R	1	50424288	Flyb:Osi3-PA	3R	1	2042711	350
Aaeg:AAEL010625-RA	supercont1.491	1	95216	Agam:ENSANGP00000020482	2R	-1	50430139	Flyb:Osi4-PA	3R	-1	2045821	350
Aaeg:AAEL005086-RA	supercont1.140	1	1107788	Agam:ENSANGP00000026872	2R	-1	50755170	Flyb:CG12948-PA	3R	-1	5572584	69
Aaeg:AAEL005080-RA	supercont1.140	1	1046821	Agam:ENSANGP00000011234	2R	-1	50758368	Flyb:PpD3-PB	3R	1	5575001	69
Aaeg:AAEL005047-RA	supercont1.140	-1	979020	Agam:ENSANGP00000011288	2R	-1	50776332	Flyb:CG16908-PA	3R	-1	5578572	69
Aaeg:AAEL013397-RA	supercont1.835	-1	302046	Agam:ENSANGP00000013964	2R	-1	52973749	Flyb:CycC-PA	3R	-1	10715349	494
Aaeg:AAEL013391-RA	supercont1.835	-1	356599	Agam:ENSANGP00000013284	2R	-1	52975443	Flyb:CG33332-PA	3R	1	10714125	494
Aaeg:AAEL013392-RA	supercont1.835	-1	385554	Agam:ENSANGP00000013293	2R	-1	52976942	Flyb:CG33331-PA	3R	1	10712816	494
Aaeg:AAEL004572-RA	supercont1.123	1	870235	Agam:ENSANGP00000029172	2R	1	57039950	Flyb:Eip93F-PA	3R	1	17816987	42
Aaeg:AAEL004561-RA	supercont1.123	-1	1013267	Agam:ENSANGP00000029718	2R	-1	57070380	Flyb:CG6678-PA	3R	1	17722443	42
Aaeg:AAEL004568-RA	supercont1.123	1	1018399	Agam:ENSANGP00000003927	2R	1	57072558	Flyb:CG6560-PA	3R	-1	17712174	42
Aaeg:AAEL007716-RA	supercont1.276	-1	1057334	Agam:ENSANGP00000013663	3L	1	4168234	Flyb:CG6938-PA	3L	1	11962104	209
Aaeg:AAEL007720-RA	supercont1.276	1	1043388	Agam:ENSANGP00000013711	3L	-1	4172297	Flyb:CG6931-PA	3L	1	11965259	209
Aaeg:AAEL007713-RA	supercont1.276	1	980897	Agam:ENSANGP00000023564	3L	-1	4179819	Flyb:viaf-PA	3L	-1	11966547	209
Aaeg:AAEL004818-RA	supercont1.131	1	592661	Agam:ENSANGP00000031827	3L	-1	5819466	Flyb:CG9246-PA	2L	1	21152450	58
Aaeg:AAEL004804-RA	supercont1.131	-1	576301	Agam:ENSANGP00000020560	3L	1	5822079	Flyb:CG9249-PA	2L	-1	21145634	58
Aaeg:AAEL004813-RA	supercont1.131	1	575119	Agam:ENSANGP00000015592	3L	-1	5822928	Flyb:Mpp6-PA	2L	1	21144806	58
Aaeg:AAEL000868-RA	supercont1.18	1	1369272	Agam:ENSANGP00000019671	3L	-1	10180801	Flyb:CG32131-PA	3L	-1	13838612	113
Aaeg:AAEL000908-RA	supercont1.18	1	1160409	Agam:ENSANGP00000021256	3L	-1	10226332	Flyb:CG8760-PA	3L	-1	13850438	113
Aaeg:AAEL000858-RA	supercont1.18	1	855168	Agam:ENSANGP00000026631	3L	-1	10290417	Flyb:Rgl-PA	3L	-1	13878769	113
Aaeg:AAEL003449-RA	supercont1.86	-1	861063	Agam:ENSANGP00000029709	3L	1	24483012	Flyb:SMC2-PA	2R	-1	10365477	501
Aaeg:AAEL003426-RA	supercont1.86	-1	900850	Agam:ENSANGP00000019885	3L	-1	24492310	Flyb:NaPi-T-PA	2R	-1	10359267	501
Aaeg:AAEL003436-RA	supercont1.86	1	1265231	Agam:ENSANGP00000019934	3L	1	24699372	Flyb:kn-PA	2R	-1	10301043	501
Aaeg:AAEL003402-RB	supercont1.86	1	768749	Agam:ENSANGP00000015216	3L	-1	35413248	Flyb:CG3376-PB	2R	1	19770770	500
Aaeg:AAEL003448-RA	supercont1.86	1	681756	Agam:ENSANGP00000015288	3L	-1	35429273	Flyb:CG13575-PA	2R	1	19763873	500
Aaeg:AAEL003420-RA	supercont1.86	1	665954	Agam:ENSANGP00000015311	3L	-1	35433171	Flyb:nord-PA	2R	1	19757165	500
Aaeg:AAEL003409-RA	supercont1.86	-1	2001924	Agam:ENSANGP00000015285	3L	1	35476436	Flyb:mRpL15-PA	3L	-1	20369467	502
Aaeg:AAEL003408-RA	supercont1.86	1	1982485	Agam:ENSANGP00000015265	3L	-1	35480716	Flyb:CG5195-PA	3L	-1	20391007	502
Aaeg:AAEL003443-RA	supercont1.86	-1	1910663	Agam:ENSANGP00000015264	3L	1	35501272	Flyb:CG5955-PA	3L	1	20402070	502
Aaeg:AAEL011857-RA	supercont1.624	1	274888	Agam:ENSANGP00000016946	3L	-1	37839530	Flyb:CG11660-PA	3L	-1	11621309	419
Aaeg:AAEL011866-RA	supercont1.624	-1	265680	Agam:ENSANGP00000009179	3L	1	37841204	Flyb:CG7339-PA	3L	1	11623205	419
Aaeg:AAEL011861-RA	supercont1.624	1	232999	Agam:ENSANGP00000016969	3L	-1	37847480	Flyb:CG32085-PA	3L	-1	11637174	419
Aaeg:AAEL001113-RA	supercont1.23	-1	2823721	Agam:ENSANGP00000009081	3L	1	39326413	Flyb:Picot-PA	2R	-1	12174532	174
Aaeg:AAEL001149-RA	supercont1.23	1	2185944	Agam:ENSANGP00000016663	3L	-1	39423877	Flyb:gprs-PA	2R	1	12160727	174
Aaeg:AAEL001121-RA	supercont1.23	1	2093826	Agam:ENSANGP00000029676	3L	-1	39437174	Flyb:CG30463-PB	2R	-1	12205165	174
Aaeg:AAEL000633-RA	supercont1.13	1	4142165	Agam:ENSANGP00000025661	3L	-1	41378103	Flyb:Tollo-PA	3L	1	15203398	57
Aaeg:AAEL000671-RA	supercont1.13	1	2388722	Agam:ENSANGP00000008963	3L	-1	41489025	Flyb:Toll-6-PA	3L	1	15304754	57
Aaeg:AAEL000644-RA	supercont1.13	-1	1285039	Agam:ENSANGP00000011660	3L	1	41694697	Flyb:CG12355-PA	3L	-1	15458451	57
Aaeg:AAEL000663-RA	supercont1.13	1	1225499	Agam:ENSANGP00000011680	3L	-1	41704238	Flyb:CG7841-PA	3L	-1	15472130	56
Aaeg:AAEL000645-RA	supercont1.13	-1	1206900	Agam:ENSANGP00000011623	3L	1	41707660	Flyb:gdl-PA	3L	1	15475499	56
Aaeg:AAEL000655-RA	supercont1.13	-1	1170094	Agam:ENSANGP00000031099	3L	1	41717883	Flyb:mex1-PA	3L	-1	15483355	56
Aaeg:AAEL010147-RA	supercont1.456	-1	243861	Agam:ENSANGP00000023802	3R	-1	845445	Flyb:CG11321-PB	2L	-1	6765587	326
Aaeg:AAEL010142-RA	supercont1.456	1	334009	Agam:ENSANGP00000010142	3R	1	867486	Flyb:CG17378-PA	2L	1	6776211	326
Aaeg:AAEL010145-RC	supercont1.456	-1	509981	Agam:ENSANGP00000010342	3R	-1	894633	Flyb:nrv2-PC	2L	-1	6793561	326
Aaeg:AAEL007856-RA	supercont1.286	-1	580177	Agam:ENSANGP00000009924	3R	-1	2578426	Flyb:eys-PB	2L	1	2347919	213
Aaeg:AAEL007859-RA	supercont1.286	1	582754	Agam:ENSANGP00000009957	3R	1	2584766	Flyb:CG9967-PB	2L	-1	2309656	213
Aaeg:AAEL007845-RA	supercont1.286	1	648066	Agam:ENSANGP00000022624	3R	1	2588893	Flyb:Rab5-PF	2L	-1	2360950	213
Aaeg:AAEL006519-RA	supercont1.209	-1	1396980	Agam:ENSANGP00000010165	3R	-1	2918161	Flyb:CG3702-PA	2L	-1	4225887	143
Aaeg:AAEL006511-RA	supercont1.209	1	1410368	Agam:ENSANGP00000010158	3R	1	2920608	Flyb:RpL40-PA	2L	1	4228216	143
Aaeg:AAEL006522-RA	supercont1.209	1	1542323	Agam:ENSANGP00000009916	3R	1	2932890	Flyb:tutl-PE	2L	1	4306915	143
Aaeg:AAEL006613-RA	supercont1.213	1	567741	Agam:ENSANGP00000009922	3R	-1	3251695	Flyb:ppk13-PA	2L	-1	21075409	152
Aaeg:AAEL006600-RC	supercont1.213	1	534056	Agam:ENSANGP00000009979	3R	-1	3253915	Flyb:CG9259-PA	2L	1	21077792	152
Aaeg:AAEL006610-RA	supercont1.213	1	354967	Agam:ENSANGP00000009951	3R	-1	3269008	Flyb:CG12050-PA	2L	-1	21086251	152
Aaeg:AAEL002014-RA	supercont1.47	-1	2719356	Agam:ENSANGP00000006997	3R	-1	4803904	Flyb:CG10721-PA	2L	1	20088329	332
Aaeg:AAEL002002-RA	supercont1.47	-1	2722489	Agam:ENSANGP00000011588	3R	-1	4805136	Flyb:mRpS18B-PB	2L	-1	20092741	332
Aaeg:AAEL001972-RA	supercont1.47	1	2732810	Agam:ENSANGP00000011751	3R	-1	4809646	Flyb:Taf13-PA	2L	-1	20089426	332
Aaeg:AAEL005021-RA	supercont1.139	-1	351296	Agam:ENSANGP00000011406	3R	1	8076919	Flyb:CG17258-PA	2L	-1	3033790	63
Aaeg:AAEL005023-RA	supercont1.139	-1	392257	Agam:ENSANGP00000011944	3R	1	8082937	Flyb:CG17257-PA	2L	1	3031445	63
Aaeg:AAEL005037-RA	supercont1.139	1	458581	Agam:ENSANGP00000011987	3R	-1	8086140	Flyb:CG17259-PA	2L	-1	3036399	63
Aaeg:AAEL008605-RA	supercont1.334	-1	700824	Agam:ENSANGP00000019707	3R	1	10112024	Flyb:CG8891-PA	2L	-1	4978918	248
Aaeg:AAEL008594-RA	supercont1.334	-1	694707	Agam:ENSANGP00000019548	3R	-1	10113297	Flyb:CG3792-PA	2L	1	4978006	248
Aaeg:AAEL008601-RA	supercont1.334	1	705457	Agam:ENSANGP00000019689	3R	1	10114690	Flyb:mRpL28-PA	2L	1	4974675	248
Aaeg:AAEL002194-RA	supercont1.51	1	699227	Agam:ENSANGP00000019313	3R	1	10812576	Flyb:Uro-PA	2L	1	7780680	360
Aaeg:AAEL002203-RA	supercont1.51	-1	762444	Agam:ENSANGP00000019344	3R	-1	10822202	Flyb:CG7191-PA	2L	1	7772856	360
Aaeg:AAEL002236-RA	supercont1.51	-1	1412337	Agam:ENSANGP00000006595	3R	-1	10916515	Flyb:CG7075-PA	2L	1	7712432	360
Aaeg:AAEL002230-RA	supercont1.51	1	2049264	Agam:ENSANGP00000006590	3R	1	11121119	Flyb:kis-PA	2L	-1	227237	362
Aaeg:AAEL002182-RA	supercont1.51	-1	2114572	Agam:ENSANGP00000019228	3R	-1	11142394	Flyb:CG3645-PA	2L	-1	253522	362
Aaeg:AAEL002209-RA	supercont1.51	-1	2417520	Agam:ENSANGP00000006588	3R	-1	11207880	Flyb:CG17075-PA	2L	-1	265236	362
Aaeg:AAEL002244-RA	supercont1.51	1	2840039	Agam:ENSANGP00000019191	3R	1	11305119	Flyb:fy-PA	2L	-1	8402399	363
Aaeg:AAEL002214-RA	supercont1.51	-1	2865683	Agam:ENSANGP00000019274	3R	-1	11308804	Flyb:CG13384-PG	2L	1	8387189	363
Aaeg:AAEL002183-RA	supercont1.51	1	2901054	Agam:ENSANGP00000019361	3R	1	11316405	Flyb:CG13393-PA	2L	-1	8383844	363
Aaeg:AAEL004515-RA	supercont1.122	1	1951984	Agam:ENSANGP00000013040	3R	1	13842693	Flyb:CG17218-PA	2L	1	12173335	41
Aaeg:AAEL004517-RA	supercont1.122	1	1977152	Agam:ENSANGP00000013253	3R	-1	13843810	Flyb:CG6583-PA	2L	-1	12172087	41
Aaeg:AAEL004533-RA	supercont1.122	-1	2053017	Agam:ENSANGP00000013038	3R	-1	13873700	Flyb:CG31760-PA	2L	1	12161453	41
Aaeg:AAEL011310-RA	supercont1.566	-1	510830	Agam:ENSANGP00000005102	3R	1	14883802	Flyb:CG9313-PA	2R	1	16489233	391
Aaeg:AAEL011311-RA	supercont1.566	1	459651	Agam:ENSANGP00000014429	3R	-1	14904608	Flyb:CG15651-PA	2R	-1	16492868	391
Aaeg:AAEL011318-RA	supercont1.566	1	417129	Agam:ENSANGP00000014144	3R	-1	14929081	Flyb:CG3216-PA	2R	-1	16496585	391
Aaeg:AAEL004319-RA	supercont1.114	1	1663746	Agam:ENSANGP00000018805	3R	-1	18396922	Flyb:Egfr-PA	2R	1	17048666	30
Aaeg:AAEL004307-RA	supercont1.114	1	1238658	Agam:ENSANGP00000022640	3R	-1	18506890	Flyb:MESK2-PI	2R	1	17020824	30
Aaeg:AAEL004313-RA	supercont1.114	-1	1036829	Agam:ENSANGP00000019325	3R	1	18560620	Flyb:Fkbp13-PA	2R	-1	16999078	30
Aaeg:AAEL005320-RA	supercont1.151	-1	237359	Agam:ENSANGP00000016669	3R	-1	19426959	Flyb:mib2-PA	2L	1	19034388	85
Aaeg:AAEL005313-RA	supercont1.151	1	350913	Agam:ENSANGP00000016745	3R	1	19482415	Flyb:CG31800-PA	2L	-1	19030028	85
Aaeg:AAEL005341-RA	supercont1.151	-1	372393	Agam:ENSANGP00000016709	3R	-1	19484495	Flyb:hk-PA	2L	-1	19028122	85
Aaeg:AAEL005341-RA	supercont1.151	-1	372393	Agam:ENSANGP00000016709	3R	-1	19484495	Flyb:hk-PA	2L	-1	19028122	85
Aaeg:AAEL005341-RA	supercont1.151	-1	372393	Agam:ENSANGP00000016709	3R	-1	19484495	Flyb:hk-PA	X	-1	10086881	85
Aaeg:AAEL005341-RA	supercont1.151	-1	372393	Agam:ENSANGP00000016709	3R	-1	19484495	Flyb:hk-PA	X	-1	10086881	85
Aaeg:AAEL008326-RA	supercont1.314	1	719859	Agam:ENSANGP00000029802	3R	1	20074418	Flyb:CG2808-PB	2L	1	3684611	234
Aaeg:AAEL008321-RA	supercont1.314	1	749262	Agam:ENSANGP00000029262	3R	1	20106053	Flyb:CG10017-PA	2L	1	3690899	234
Aaeg:AAEL008320-RB	supercont1.314	-1	930324	Agam:ENSANGP00000006408	3R	-1	20121033	Flyb:cutlet-PA	2L	-1	3709487	234
Aaeg:AAEL010541-RA	supercont1.485	-1	372664	Agam:ENSANGP00000028957	3R	1	22277120	Flyb:CG31757-PA	2L	-1	11832757	345
Aaeg:AAEL010539-RA	supercont1.485	-1	234409	Agam:ENSANGP00000019368	3R	1	22315052	Flyb:Pde1c-PA	2L	-1	11818922	345
Aaeg:AAEL010543-RA	supercont1.485	-1	128429	Agam:ENSANGP00000019408	3R	1	22353508	Flyb:CG14939-PA	2L	-1	11811775	345
Aaeg:AAEL001914-RA	supercont1.45	-1	1999418	Agam:ENSANGP00000021503	3R	1	27421219	Flyb:CG3921-PA	2L	1	3796452	318
Aaeg:AAEL001888-RA	supercont1.45	-1	1827753	Agam:ENSANGP00000027510	3R	1	27495527	Flyb:l(2)k16918-PB	2L	1	3807494	318
Aaeg:AAEL001912-RA	supercont1.45	-1	1575062	Agam:ENSANGP00000025119	3R	1	27562579	Flyb:slp2-PA	2L	1	3837874	318
Aaeg:AAEL007950-RA	supercont1.291	-1	840762	Agam:ENSANGP00000016740	3R	1	28583395	Flyb:Eps-15-PC	2R	-1	20279428	215
Aaeg:AAEL007962-RA	supercont1.291	-1	910974	Agam:ENSANGP00000025358	3R	-1	28596421	Flyb:CG16936-PA	2R	-1	20274806	215
Aaeg:AAEL007952-RA	supercont1.291	1	995492	Agam:ENSANGP00000016861	3R	1	28608892	Flyb:CG3880-PA	2R	1	20269515	215
Aaeg:AAEL000341-RA	supercont1.6	1	1961352	Agam:ENSANGP00000027021	3R	-1	28918715	Flyb:Oli-PA	2L	1	17586546	407
Aaeg:AAEL000331-RA	supercont1.6	1	1374620	Agam:ENSANGP00000010562	3R	1	29063423	Flyb:CG6412-PA	2L	-1	17495964	407
Aaeg:AAEL000334-RA	supercont1.6	1	1329376	Agam:ENSANGP00000010518	3R	1	29081877	Flyb:qua-PB	2L	-1	17485326	407
Aaeg:AAEL007245-RA	supercont1.244	-1	875541	Agam:ENSANGP00000012260	3R	1	30776953	Flyb:CG7337-PA	2L	1	1926517	189
Aaeg:AAEL007233-RA	supercont1.244	1	670570	Agam:ENSANGP00000018334	3R	-1	30819713	Flyb:CG31670-PA	2L	-1	1952692	189
Aaeg:AAEL007229-RA	supercont1.244	-1	576915	Agam:ENSANGP00000018365	3R	1	30853508	Flyb:CG10908-PA	2L	1	1974710	189
Aaeg:AAEL005347-RA	supercont1.152	-1	734967	Agam:ENSANGP00000019971	3R	-1	36155886	Flyb:CG9098-PA	2L	-1	6010073	88
Aaeg:AAEL005363-RA	supercont1.152	1	1147307	Agam:ENSANGP00000020008	3R	1	36253797	Flyb:CG9109-PA	2L	-1	6032815	88
Aaeg:AAEL005367-RA	supercont1.152	-1	1208108	Agam:ENSANGP00000020921	3R	-1	36260929	Flyb:myotubularin-PA	2L	-1	6035855	88
Aaeg:AAEL010764-RA	supercont1.507	1	576063	Agam:ENSANGP00000021005	3R	-1	36722026	Flyb:CG8665-PA	2L	1	21361885	358
Aaeg:AAEL010772-RA	supercont1.507	-1	591945	Agam:ENSANGP00000022641	3R	-1	36734173	Flyb:dtr-PA	2L	1	21351880	358
Aaeg:AAEL010783-RA	supercont1.507	1	664180	Agam:ENSANGP00000022705	3R	1	36763622	Flyb:nrv3-PC	2L	1	21373771	358
Aaeg:AAEL000596-RA	supercont1.12	1	2243626	Agam:ENSANGP00000010150	3R	-1	41857866	Flyb:ninaC-PA	2L	1	7380368	35
Aaeg:AAEL000600-RA	supercont1.12	1	2187520	Agam:ENSANGP00000010105	3R	-1	41864723	Flyb:Wnt10-PA	2L	1	7376009	35
Aaeg:AAEL000618-RA	supercont1.12	-1	1942283	Agam:ENSANGP00000010191	3R	1	41922542	Flyb:Wnt6-PA	2L	1	7351587	35
Aaeg:AAEL010349-RA	supercont1.472	-1	505762	Agam:ENSANGP00000010185	3R	1	42059848	Flyb:CG6388-PA	2L	1	12429013	336
Aaeg:AAEL010346-RA	supercont1.472	-1	494262	Agam:ENSANGP00000029318	3R	1	42061602	Flyb:CG5435-PA	2L	-1	12430431	336
Aaeg:AAEL010340-RA	supercont1.472	1	480584	Agam:ENSANGP00000010223	3R	-1	42065412	Flyb:SC35-PA	2L	-1	12432515	336
Aaeg:AAEL005736-RB	supercont1.172	1	882821	Agam:ENSANGP00000025039	3R	1	49410630	Flyb:CG17912-PA	2L	1	16740268	109
Aaeg:AAEL005738-RA	supercont1.172	1	1002152	Agam:ENSANGP00000012608	3R	-1	49428454	Flyb:yellow-b-PA	2L	1	16752809	109
Aaeg:AAEL005729-RA	supercont1.172	1	1054740	Agam:ENSANGP00000006133	3R	-1	49435727	Flyb:CG13278-PA	2L	-1	16755162	109
Aaeg:AAEL002323-RA	supercont1.54	-1	1256911	Agam:ENSANGP00000017406	X	1	913910	Flyb:CG11533-PC	4	-1	498612	378
Aaeg:AAEL002335-RA	supercont1.54	1	1112035	Agam:ENSANGP00000017338	X	-1	938992	Flyb:zfh2-PA	4	1	550277	378
Aaeg:AAEL002359-RA	supercont1.54	-1	945116	Agam:ENSANGP00000031339	X	1	959579	Flyb:onecut-PA	4	-1	624154	378
Aaeg:AAEL006290-RA	supercont1.199	1	1001740	Agam:ENSANGP00000017387	X	-1	1265951	Flyb:CG31122-PA	3R	-1	14234364	130
Aaeg:AAEL006293-RA	supercont1.199	-1	958219	Agam:ENSANGP00000031896	X	1	1269962	Flyb:CG10864-PA	3R	-1	14236509	130
Aaeg:AAEL006301-RA	supercont1.199	1	755184	Agam:ENSANGP00000029289	X	-1	1304199	Flyb:fru-PL	3R	-1	14256680	130
Aaeg:AAEL003025-RA	supercont1.75	-1	2162722	Agam:ENSANGP00000012996	X	-1	4347259	Flyb:CG32543-PA	X	1	18659298	460
Aaeg:AAEL003026-RA	supercont1.75	-1	2202936	Agam:ENSANGP00000012471	X	-1	4351304	Flyb:CG7095-PA	X	1	18655812	460
Aaeg:AAEL003043-RA	supercont1.75	-1	2372187	Agam:ENSANGP00000008060	X	-1	4381689	Flyb:CG7058-PA	X	1	18642902	460
Aaeg:AAEL002513-RA	supercont1.59	-1	3012333	Agam:ENSANGP00000017621	X	1	14313104	Flyb:m-PA	X	1	11599830	401
Aaeg:AAEL002537-RA	supercont1.59	1	2828722	Agam:ENSANGP00000021359	X	-1	14353028	Flyb:dy-PA	X	-1	11607817	401
Aaeg:AAEL002520-RA	supercont1.59	-1	2399707	Agam:ENSANGP00000021342	X	-1	14392693	Flyb:Karl-PB	X	1	11624269	401
Aaeg:AAEL007750-RA	supercont1.278	1	1252413	Agam:ENSANGP00000020516	X	1	18252938	Flyb:CG11095-PA	X	1	13646153	210
Aaeg:AAEL007761-RA	supercont1.278	-1	1283614	Agam:ENSANGP00000024624	X	-1	18260405	Flyb:Clic-PA	X	-1	13651806	210
Aaeg:AAEL007756-RA	supercont1.278	1	1175913	Agam:ENSANGP00000018691	X	-1	18292179	Flyb:CG33174-PD	X	1	13639034	210
Aaeg:AAEL007029-RB	supercont1.232	-1	775179	Agam:ENSANGP00000025288	X	-1	18601744	Flyb:tmod-PB	3R	1	26399983	176
Aaeg:AAEL007034-RA	supercont1.232	1	1031317	Agam:ENSANGP00000018527	X	1	18634483	Flyb:jdp-PB	3R	-1	26348053	176
Aaeg:AAEL007030-RA	supercont1.232	1	1230580	Agam:ENSANGP00000018598	X	1	18657413	Flyb:CDase-PE	3R	1	26289921	176
Aaeg:AAEL011358-RA	supercont1.571	1	474297	Agam:ENSANGP00000018589	X	1	18802588	Flyb:Orc5-PA	2L	1	13830753	394
Aaeg:AAEL011352-RA	supercont1.571	-1	486922	Agam:ENSANGP00000025750	X	-1	18804328	Flyb:DNApol-gamma35-PA	2L	-1	13832060	394
Aaeg:AAEL011360-RA	supercont1.571	-1	499116	Agam:ENSANGP00000018628	X	-1	18805895	Flyb:CG33649-PA	2L	-1	13832849	394
Aaeg:AAEL012876-RA	supercont1.753	1	376477	Agam:ENSANGP00000000640	2L	1	204536	Flyb:CG1463-PA	X	-1	12444931	462
Aaeg:AAEL012882-RA	supercont1.753	-1	325716	Agam:ENSANGP00000026850	2L	1	209085	Flyb:CG2543-PA	X	1	12447845	462
Aaeg:AAEL007178-RA	supercont1.241	1	871975	Agam:ENSANGP00000012729	2L	1	4321851	Flyb:CG12851-PA	2R	1	20459051	185
Aaeg:AAEL007179-RA	supercont1.241	-1	1013817	Agam:ENSANGP00000026575	2L	-1	4354054	Flyb:CG2765-PA	2R	-1	20470331	185
Aaeg:AAEL000220-RA	supercont1.4	-1	4975084	Agam:ENSANGP00000026582	2L	-1	4382734	Flyb:CG1399-PA	2R	-1	3191656	295
Aaeg:AAEL000240-RA	supercont1.4	-1	5155561	Agam:ENSANGP00000025105	2L	1	4391798	Flyb:CG30493-PB	2R	1	3212964	295
Aaeg:AAEL004161-RA	supercont1.109	1	250511	Agam:ENSANGP00000013261	2L	1	4953914	Flyb:CG3420-PA	2R	-1	2268477	20
Aaeg:AAEL004176-RA	supercont1.109	-1	281388	Agam:ENSANGP00000013151	2L	-1	4962457	Flyb:Eb1-PC	2R	1	2265761	20
Aaeg:AAEL004428-RA	supercont1.119	-1	298421	Agam:ENSANGP00000002371	2L	1	5801627	Flyb:HLH4C-PA	X	-1	4491354	33
Aaeg:AAEL004446-RA	supercont1.119	1	360984	Agam:ENSANGP00000021302	2L	-1	5806555	Flyb:CG3081-PA	X	-1	4485439	33
Aaeg:AAEL010080-RA	supercont1.452	1	113580	Agam:ENSANGP00000011420	2L	1	7188531	Flyb:Orc1-PA	2R	-1	3035949	321
Aaeg:AAEL010081-RA	supercont1.452	-1	131518	Agam:ENSANGP00000002426	2L	-1	7192080	Flyb:CG2144-PA	2R	1	3032753	321
Aaeg:AAEL008777-RA	supercont1.348	1	965576	Agam:ENSANGP00000002451	2L	-1	7558781	Flyb:Abl-PA	3L	-1	16600219	260
Aaeg:AAEL008770-RA	supercont1.348	-1	778264	Agam:ENSANGP00000011435	2L	-1	7588316	Flyb:Pros26-PA	3L	-1	16575187	260
Aaeg:AAEL011438-RA	supercont1.580	1	239602	Agam:ENSANGP00000003363	2L	-1	8686089	Flyb:CG32809-PB	X	-1	1541844	397
Aaeg:AAEL011440-RA	supercont1.580	-1	152056	Agam:ENSANGP00000029450	2L	1	8694531	Flyb:b6-PA	X	1	1544482	397
Aaeg:AAEL010509-RA	supercont1.482	1	120679	Agam:ENSANGP00000010663	2L	1	9680733	Flyb:Amph-PA	2R	1	8118450	342
Aaeg:AAEL010506-RA	supercont1.482	1	221565	Agam:ENSANGP00000025381	2L	1	9741686	Flyb:Galpha49B-PH	2R	1	8133627	342
Aaeg:AAEL001689-RA	supercont1.39	-1	1808609	Agam:ENSANGP00000009982	2L	-1	9978920	Flyb:Rx-PA	2R	1	16434537	286
Aaeg:AAEL001695-RA	supercont1.39	1	2288251	Agam:ENSANGP00000009907	2L	1	10111120	Flyb:otp-PA	2R	-1	16398075	286
Aaeg:AAEL001270-RA	supercont1.28	1	467229	Agam:ENSANGP00000009931	2L	-1	10250410	Flyb:CG11127-PA	2R	1	2976076	211
Aaeg:AAEL001251-RC	supercont1.28	-1	478590	Agam:ENSANGP00000009984	2L	-1	10254106	Flyb:p47-PA	2R	-1	2977718	211
Aaeg:AAEL007423-RA	supercont1.255	-1	945263	Agam:ENSANGP00000015695	2L	1	10576671	Flyb:CG12935-PA	2R	1	6326071	199
Aaeg:AAEL007431-RA	supercont1.255	1	943673	Agam:ENSANGP00000015687	2L	-1	10577857	Flyb:CG7637-PA	2R	-1	6326655	199
Aaeg:AAEL013139-RF	supercont1.796	1	75542	Agam:ENSANGP00000015684	2L	-1	10792604	Flyb:Rho1-PG	2R	1	11619696	475
Aaeg:AAEL013147-RA	supercont1.796	1	14608	Agam:ENSANGP00000015605	2L	-1	10824181	Flyb:Dg-PB	2R	-1	11601341	475
Aaeg:AAEL012372-RA	supercont1.685	-1	392371	Agam:ENSANGP00000028118	2L	1	12222937	Flyb:CG6685-PA	3L	-1	9941831	444
Aaeg:AAEL012374-RA	supercont1.685	1	211771	Agam:ENSANGP00000003734	2L	-1	12260101	Flyb:CG12524-PA	3L	1	9927930	444
Aaeg:AAEL000248-RA	supercont1.4	-1	4542454	Agam:ENSANGP00000015785	2L	1	12536622	Flyb:Dgp-1-PB	2R	-1	13684987	293
Aaeg:AAEL000221-RA	supercont1.4	-1	4571060	Agam:ENSANGP00000015908	2L	-1	12539326	Flyb:MED9-PB	2R	1	13682666	293
Aaeg:AAEL006278-RA	supercont1.198	-1	1317479	Agam:ENSANGP00000015877	2L	1	13286947	Flyb:CG12958-PA	2R	1	10936811	129
Aaeg:AAEL006268-RA	supercont1.198	-1	1218320	Agam:ENSANGP00000028018	2L	1	13310137	Flyb:CG12959-PA	2R	1	10971470	129
Aaeg:AAEL005071-RA	supercont1.140	-1	2129901	Agam:ENSANGP00000019614	2L	1	13799255	Flyb:CG2017-PB	3R	-1	1685077	71
Aaeg:AAEL005075-RA	supercont1.140	1	2033190	Agam:ENSANGP00000019534	2L	-1	13801977	Flyb:ECSIT-PA	3R	1	1683006	71
Aaeg:AAEL008519-RA	supercont1.330	-1	335220	Agam:ENSANGP00000020952	2L	-1	14036809	Flyb:dup-PA	2R	-1	10893532	245
Aaeg:AAEL008507-RA	supercont1.330	1	361032	Agam:ENSANGP00000006891	2L	1	14043336	Flyb:SRPK-PA	2R	1	10898513	245
Aaeg:AAEL003083-RA	supercont1.76	-1	2092952	Agam:ENSANGP00000006920	2L	-1	14276495	Flyb:CG3530-PB	2R	-1	18900588	468
Aaeg:AAEL003089-RA	supercont1.76	-1	2237576	Agam:ENSANGP00000020995	2L	-1	14293574	Flyb:CG3520-PA	2R	-1	18907020	468
Aaeg:AAEL002355-RA	supercont1.54	-1	2534452	Agam:ENSANGP00000027320	2L	1	14372362	Flyb:CG13424-PA	2R	1	16072861	380
Aaeg:AAEL002329-RB	supercont1.54	-1	2471263	Agam:ENSANGP00000021039	2L	-1	14379245	Flyb:Mgat1-PA	2R	-1	16075769	380
Aaeg:AAEL004657-RA	supercont1.126	-1	165541	Agam:ENSANGP00000021078	2L	1	14831604	Flyb:CG15012-PB	3L	-1	4275367	49
Aaeg:AAEL004661-RA	supercont1.126	1	200015	Agam:ENSANGP00000021081	2L	-1	14833522	Flyb:Hexo1-PD	3L	1	4273612	49
Aaeg:AAEL010900-RA	supercont1.517	1	652808	Agam:ENSANGP00000014262	2L	-1	15081776	Flyb:Kap-alpha1-PA	3L	1	19742720	369
Aaeg:AAEL010906-RA	supercont1.517	-1	622169	Agam:ENSANGP00000014276	2L	1	15085032	Flyb:CG15881-PA	3L	1	19740337	369
Aaeg:AAEL010901-RB	supercont1.517	1	184165	Agam:ENSANGP00000014225	2L	-1	15148800	Flyb:ergic53-PB	3L	1	8510007	368
Aaeg:AAEL010905-RA	supercont1.517	1	56403	Agam:ENSANGP00000014064	2L	-1	15162165	Flyb:foi-PA	3L	1	8505858	368
Aaeg:AAEL006744-RA	supercont1.219	1	526120	Agam:ENSANGP00000014161	2L	-1	15182785	Flyb:CG8368-PB	3L	1	6581313	158
Aaeg:AAEL006723-RA	supercont1.219	1	663774	Agam:ENSANGP00000026972	2L	-1	15190303	Flyb:CG8398-PA	3L	1	6587677	158
Aaeg:AAEL006755-RA	supercont1.219	-1	676718	Agam:ENSANGP00000014127	2L	-1	15210590	Flyb:CG6674-PA	3L	-1	9945539	159
Aaeg:AAEL006743-RA	supercont1.219	1	691205	Agam:ENSANGP00000007006	2L	1	15212643	Flyb:Ard1-PC	3L	1	9947516	159
Aaeg:AAEL006738-RA	supercont1.219	-1	713594	Agam:ENSANGP00000007008	2L	-1	15215907	Flyb:p130CAS-PB	3L	1	156585	160
Aaeg:AAEL006732-RA	supercont1.219	-1	1225393	Agam:ENSANGP00000007011	2L	-1	15335535	Flyb:CG6845-PA	3L	1	131615	160
Aaeg:AAEL006734-RA	supercont1.219	1	1587915	Agam:ENSANGP00000014070	2L	1	15374132	Flyb:CG6404-PA	3L	-1	10859178	161
Aaeg:AAEL006731-RA	supercont1.219	-1	1592357	Agam:ENSANGP00000014212	2L	-1	15375006	Flyb:CG7949-PA	3L	1	10857171	161
Aaeg:AAEL006553-RA	supercont1.210	-1	1235819	Agam:ENSANGP00000014159	2L	1	15427346	Flyb:CG5027-PA	3L	1	16195293	148
Aaeg:AAEL006557-RA	supercont1.210	-1	1199726	Agam:ENSANGP00000014166	2L	-1	15429110	Flyb:PDCD-5-PA	3L	-1	16196808	148
Aaeg:AAEL011955-RA	supercont1.637	1	451767	Agam:ENSANGP00000030273	2L	-1	16407049	Flyb:CG33558-PA	2R	-1	2456561	427
Aaeg:AAEL011950-RA	supercont1.637	-1	290033	Agam:ENSANGP00000021757	2L	1	16485066	Flyb:CG30157-PA	2R	-1	2486300	427
Aaeg:AAEL013648-RA	supercont1.889	1	188303	Agam:ENSANGP00000021191	2L	-1	16542589	Flyb:CG1441-PB	2R	-1	5411983	510
Aaeg:AAEL013645-RA	supercont1.889	1	82368	Agam:ENSANGP00000029025	2L	1	16585440	Flyb:Fmrf-PA	2R	1	5421472	510
Aaeg:AAEL011272-RA	supercont1.562	1	219437	Agam:ENSANGP00000027407	2L	1	16656226	Flyb:Nmda1-PD	2R	-1	8394281	389
Aaeg:AAEL011275-RA	supercont1.562	1	317438	Agam:ENSANGP00000021195	2L	-1	16660977	Flyb:CG3790-PA	2R	-1	8389792	389
Aaeg:AAEL014296-RA	supercont1.1061	-1	105162	Agam:ENSANGP00000017770	2L	-1	17016398	Flyb:CG33523-PD	3L	1	5900641	12
Aaeg:AAEL014297-RA	supercont1.1061	1	202574	Agam:ENSANGP00000017656	2L	1	17027892	Flyb:CG10483-PA	3L	-1	5893559	12
Aaeg:AAEL000266-RA	supercont1.5	1	3903289	Agam:ENSANGP00000021668	2L	-1	18695580	Flyb:DopEcR-PC	3L	-1	4352546	355
Aaeg:AAEL000269-RA	supercont1.5	1	3667258	Agam:ENSANGP00000021873	2L	-1	18746521	Flyb:CG15019-PA	3L	-1	4388266	355
Aaeg:AAEL005981-RA	supercont1.183	-1	1029629	Agam:ENSANGP00000015893	2L	1	19559983	Flyb:CG7422-PA	3L	-1	7710966	118
Aaeg:AAEL005988-RA	supercont1.183	-1	1016224	Agam:ENSANGP00000015904	2L	-1	19563996	Flyb:CG8492-PA	3L	-1	7704024	118
Aaeg:AAEL003071-RA	supercont1.76	1	716442	Agam:ENSANGP00000026457	2L	1	20162986	Flyb:CG6745-PA	3L	1	8485250	465
Aaeg:AAEL003075-RA	supercont1.76	-1	671006	Agam:ENSANGP00000031647	2L	1	20187609	Flyb:CG6765-PA	3L	1	8490319	465
Aaeg:AAEL000984-RA	supercont1.20	1	1451525	Agam:ENSANGP00000028322	2L	-1	20964399	Flyb:pbl-PB	3L	-1	7878039	133
Aaeg:AAEL001011-RA	supercont1.20	1	1308194	Agam:ENSANGP00000010344	2L	-1	21038132	Flyb:CG8111-PA	3L	-1	7888358	133
Aaeg:AAEL000993-RA	supercont1.20	1	1272710	Agam:ENSANGP00000010385	2L	1	21137337	Flyb:dally-PA	3L	1	8832721	132
Aaeg:AAEL000999-RA	supercont1.20	1	876857	Agam:ENSANGP00000010410	2L	-1	21193621	Flyb:Mcm7-PA	3L	1	8866907	132
Aaeg:AAEL007412-RA	supercont1.254	-1	906166	Agam:ENSANGP00000004452	2L	1	21468287	Flyb:CG32052-PA	3L	1	9780170	198
Aaeg:AAEL007410-RA	supercont1.254	1	24990	Agam:ENSANGP00000010413	2L	-1	21621454	Flyb:I-2-PA	3L	-1	9809516	198
Aaeg:AAEL007409-RA	supercont1.254	1	7103	Agam:ENSANGP00000028627	2L	1	21629064	Flyb:oxt-PB	3L	-1	2244400	197
Aaeg:AAEL007406-RA	supercont1.254	-1	14711	Agam:ENSANGP00000025687	2L	-1	21631462	Flyb:CG2034-PA	3L	1	2241744	197
Aaeg:AAEL008684-RA	supercont1.341	1	739152	Agam:ENSANGP00000017377	2L	-1	22093364	Flyb:sano-PA	2R	1	14471718	258
Aaeg:AAEL008683-RA	supercont1.341	1	72088	Agam:ENSANGP00000017420	2L	-1	22282529	Flyb:Topors-PA	2R	1	14489893	258
Aaeg:AAEL010531-RA	supercont1.484	-1	193170	Agam:ENSANGP00000025689	2L	1	22624196	Flyb:CG12920-PA	2R	1	5581888	343
Aaeg:AAEL010520-RA	supercont1.484	1	108453	Agam:ENSANGP00000017378	2L	-1	22626825	Flyb:CG1371-PA	2R	-1	5585222	343
Aaeg:AAEL010037-RA	supercont1.447	1	522360	Agam:ENSANGP00000017432	2L	-1	22639687	Flyb:Pgm-PA	3L	-1	16092574	315
Aaeg:AAEL010032-RA	supercont1.447	-1	497775	Agam:ENSANGP00000028234	2L	1	22642359	Flyb:SsRbeta-PA	3L	1	16095563	315
Aaeg:AAEL011973-RA	supercont1.639	1	571642	Agam:ENSANGP00000017396	2L	1	22655483	Flyb:Faa-PA	3L	-1	4056496	429
Aaeg:AAEL011981-RA	supercont1.639	-1	620510	Agam:ENSANGP00000016822	2L	-1	22666974	Flyb:Gad1-PA	3L	-1	4063611	429
Aaeg:AAEL003551-RA	supercont1.90	1	62958	Agam:ENSANGP00000030968	2L	1	22680701	Flyb:CG14989-PB	3L	1	4073361	516
Aaeg:AAEL003554-RA	supercont1.90	-1	117665	Agam:ENSANGP00000004511	2L	-1	22696663	Flyb:CG14995-PA	3L	-1	4081816	516
Aaeg:AAEL003552-RA	supercont1.90	1	259042	Agam:ENSANGP00000017467	2L	1	22716487	Flyb:RpII18-PA	3R	1	1197836	517
Aaeg:AAEL003559-RA	supercont1.90	-1	269564	Agam:ENSANGP00000017429	2L	-1	22717515	Flyb:CG2669-PA	3R	-1	1199309	517
Aaeg:AAEL001379-RA	supercont1.31	1	328977	Agam:ENSANGP00000013465	2L	1	23136993	Flyb:CG6664-PA	3L	-1	16979613	229
Aaeg:AAEL001387-RA	supercont1.31	1	486826	Agam:ENSANGP00000028206	2L	1	23168554	Flyb:CG3764-PA	3L	-1	16963735	229
Aaeg:AAEL009038-RA	supercont1.363	1	11245	Agam:ENSANGP00000014133	2L	1	23643611	Flyb:CG9953-PA	3L	1	6944638	269
Aaeg:AAEL009035-RA	supercont1.363	-1	24782	Agam:ENSANGP00000013583	2L	-1	23646178	Flyb:CG10064-PA	3L	-1	6940512	269
Aaeg:AAEL011713-RA	supercont1.604	1	101164	Agam:ENSANGP00000014191	2L	1	23685230	Flyb:CG10581-PA	3L	-1	20967718	412
Aaeg:AAEL011701-RA	supercont1.604	-1	106885	Agam:ENSANGP00000013553	2L	-1	23686889	Flyb:Sin-PA	3L	1	20966520	412
Aaeg:AAEL009620-RA	supercont1.412	-1	409758	Agam:ENSANGP00000014182	2L	-1	23698821	Flyb:CG9965-PA	3L	1	2939678	300
Aaeg:AAEL009619-RA	supercont1.412	-1	475022	Agam:ENSANGP00000013550	2L	-1	23726817	Flyb:Shab-PB	3L	1	2922104	300
Aaeg:AAEL009606-RA	supercont1.412	-1	847541	Agam:ENSANGP00000013523	2L	-1	23809540	Flyb:CG4452-PB	3L	1	9342906	301
Aaeg:AAEL009601-RA	supercont1.412	-1	893973	Agam:ENSANGP00000013603	2L	-1	23814362	Flyb:CG4446-PA	3L	1	9335615	301
Aaeg:AAEL012515-RA	supercont1.704	1	126036	Agam:ENSANGP00000013561	2L	1	23854968	Flyb:TSG101-PA	3L	1	16808770	447
Aaeg:AAEL012511-RA	supercont1.704	-1	142172	Agam:ENSANGP00000014143	2L	1	23856715	Flyb:CG9669-PA	3L	-1	16810003	447
Aaeg:AAEL002251-RA	supercont1.52	1	1406187	Agam:ENSANGP00000024928	2L	1	23944454	Flyb:Spn-PA	3L	-1	2508242	371
Aaeg:AAEL002269-RA	supercont1.52	1	1470891	Agam:ENSANGP00000010803	2L	-1	23964966	Flyb:CG16758-PD	3L	-1	2484938	371
Aaeg:AAEL010837-RA	supercont1.511	1	824836	Agam:ENSANGP00000010724	2L	1	24040286	Flyb:scaf6-PA	3L	-1	17004956	367
Aaeg:AAEL010832-RA	supercont1.511	1	877452	Agam:ENSANGP00000010723	2L	1	24049389	Flyb:CG14057-PA	3L	-1	17010013	367
Aaeg:AAEL007200-RA	supercont1.243	1	467858	Agam:ENSANGP00000010767	2L	-1	24492981	Flyb:CG13743-PA	2R	-1	4564729	186
Aaeg:AAEL007208-RA	supercont1.243	-1	53309	Agam:ENSANGP00000010885	2L	1	24551196	Flyb:ana-PA	2R	1	4584875	186
Aaeg:AAEL006226-RA	supercont1.195	1	538788	Agam:ENSANGP00000012549	2L	1	25673411	Flyb:fal-PA	3L	1	19261901	127
Aaeg:AAEL006219-RA	supercont1.195	-1	609568	Agam:ENSANGP00000005874	2L	-1	25678246	Flyb:pip-PL	3L	-1	19288703	127
Aaeg:AAEL012636-RA	supercont1.720	-1	98545	Agam:ENSANGP00000027037	2L	-1	25928693	Flyb:CG5157-PA	3L	-1	16102142	452
Aaeg:AAEL012637-RA	supercont1.720	1	74400	Agam:ENSANGP00000005880	2L	-1	25937929	Flyb:CG16838-PD	3L	1	16099831	452
Aaeg:AAEL014318-RA	supercont1.1068	1	51344	Agam:ENSANGP00000020423	2L	1	25962283	Flyb:Msr-110-PB	3L	-1	5546205	13
Aaeg:AAEL014317-RA	supercont1.1068	-1	131350	Agam:ENSANGP00000020453	2L	-1	25977029	Flyb:bc10-PA	3L	1	5539690	13
Aaeg:AAEL014314-RA	supercont1.1068	1	139473	Agam:ENSANGP00000020414	2L	1	25978703	Flyb:DNApol-alpha50-PA	3L	1	8317606	14
Aaeg:AAEL014315-RA	supercont1.1068	1	161995	Agam:ENSANGP00000020373	2L	1	25982605	Flyb:CG17352-PD	3L	-1	8327938	14
Aaeg:AAEL006555-RA	supercont1.210	-1	1556623	Agam:ENSANGP00000031636	2L	1	26516191	Flyb:CG32062-PD	3L	1	10528375	149
Aaeg:AAEL006554-RA	supercont1.210	-1	1374403	Agam:ENSANGP00000020332	2L	1	26582267	Flyb:CG32066-PC	3L	-1	10624322	149
Aaeg:AAEL005269-RC	supercont1.148	-1	1843821	Agam:ENSANGP00000020419	2L	1	26648719	Flyb:CG4169-PA	3L	1	16550469	81
Aaeg:AAEL005258-RB	supercont1.148	1	1837232	Agam:ENSANGP00000020345	2L	-1	26650543	Flyb:Syx8-PA	3L	-1	16551863	81
Aaeg:AAEL001682-RA	supercont1.39	1	44653	Agam:ENSANGP00000019739	2L	1	26903588	Flyb:nudC-PA	3L	1	16779239	285
Aaeg:AAEL001680-RA	supercont1.39	-1	61333	Agam:ENSANGP00000020472	2L	-1	26905752	Flyb:CG13024-PA	3L	-1	16775708	285
Aaeg:AAEL006728-RA	supercont1.219	1	428601	Agam:ENSANGP00000020629	2L	1	28577677	Flyb:vih-PA	3L	1	12478792	157
Aaeg:AAEL006724-RA	supercont1.219	-1	493417	Agam:ENSANGP00000020608	2L	1	28580512	Flyb:CG10646-PA	3L	-1	12477174	157
Aaeg:AAEL001935-RA	supercont1.46	-1	1983908	Agam:ENSANGP00000020538	2L	1	28599081	Flyb:CG1311-PA	3L	1	4263270	328
Aaeg:AAEL001945-RA	supercont1.46	1	1952813	Agam:ENSANGP00000026833	2L	-1	28602206	Flyb:CG11586-PA	3L	-1	4245578	328
Aaeg:AAEL011502-RA	supercont1.585	-1	608976	Agam:ENSANGP00000013789	2L	1	29422516	Flyb:CG8079-PB	2R	1	10735867	398
Aaeg:AAEL011506-RA	supercont1.585	-1	198666	Agam:ENSANGP00000013791	2L	1	29498615	Flyb:Fs-PA	2R	-1	10745181	398
Aaeg:AAEL003070-RA	supercont1.76	1	26395	Agam:ENSANGP00000013000	2L	1	30453249	Flyb:CG5290-PA	3L	-1	17876290	464
Aaeg:AAEL003087-RA	supercont1.76	-1	19158	Agam:ENSANGP00000013002	2L	-1	30455086	Flyb:CG14353-PA	3L	1	17874103	464
Aaeg:AAEL006721-RB	supercont1.219	-1	238773	Agam:ENSANGP00000024901	2L	-1	30525175	Flyb:Nc73EF-PF	3L	1	16928558	156
Aaeg:AAEL006737-RA	supercont1.219	1	380852	Agam:ENSANGP00000013015	2L	1	30555765	Flyb:CG9665-PA	3L	-1	16905271	156
Aaeg:AAEL003061-RA	supercont1.76	1	1767423	Agam:ENSANGP00000032030	2L	1	31589610	Flyb:CG15072-PA	2R	1	14211952	467
Aaeg:AAEL003085-RA	supercont1.76	1	1788500	Agam:ENSANGP00000032029	2L	1	31598815	Flyb:CG18604-PA	2R	1	14218238	467
Aaeg:AAEL010843-RA	supercont1.511	1	456843	Agam:ENSANGP00000014056	2L	1	32373309	Flyb:CG17737-PA	3L	1	3207510	366
Aaeg:AAEL010841-RA	supercont1.511	1	605714	Agam:ENSANGP00000013491	2L	1	32416620	Flyb:CG11505-PC	3L	1	3212745	366
Aaeg:AAEL002247-RA	supercont1.52	1	453024	Agam:ENSANGP00000004326	2L	1	33620577	Flyb:CG8647-PA	3L	1	6986728	370
Aaeg:AAEL002256-RA	supercont1.52	1	990694	Agam:ENSANGP00000010005	2L	1	33737864	Flyb:CG33171-PE	3L	1	7009846	370
Aaeg:AAEL013128-RA	supercont1.793	-1	165795	Agam:ENSANGP00000031619	2L	-1	33787072	Flyb:Baldspot-PB	3L	-1	16620003	474
Aaeg:AAEL013121-RB	supercont1.793	-1	265505	Agam:ENSANGP00000010037	2L	-1	33834796	Flyb:zetaCOP-PC	3L	-1	16637862	474
Aaeg:AAEL004246-RA	supercont1.112	-1	1068909	Agam:ENSANGP00000022874	2L	-1	34295747	Flyb:sif-PC	3L	1	5695567	27
Aaeg:AAEL004259-RA	supercont1.112	-1	1561157	Agam:ENSANGP00000011455	2L	-1	34412902	Flyb:lin-28-PA	3L	1	5629995	27
Aaeg:AAEL003729-RA	supercont1.95	-1	1533523	Agam:ENSANGP00000011329	2L	1	35654858	Flyb:T3dh-PA	2R	-1	17838736	524
Aaeg:AAEL003720-RA	supercont1.95	-1	1574735	Agam:ENSANGP00000027889	2L	1	35656065	Flyb:Gp150-PD	2R	1	17833327	524
Aaeg:AAEL010524-RA	supercont1.484	-1	436865	Agam:ENSANGP00000020363	2L	1	38083688	Flyb:egr-PB	2R	1	5593286	344
Aaeg:AAEL010523-RA	supercont1.484	-1	296191	Agam:ENSANGP00000020167	2L	1	38108827	Flyb:CG2269-PB	2R	1	5604732	344
Aaeg:AAEL009974-RA	supercont1.442	1	899112	Agam:ENSANGP00000012769	2L	-1	39304361	Flyb:RabX4-PA	3R	-1	20653197	313
Aaeg:AAEL009957-RA	supercont1.442	-1	821513	Agam:ENSANGP00000012802	2L	1	39329585	Flyb:CG5807-PA	3R	-1	20635754	313
Aaeg:AAEL009959-RA	supercont1.442	-1	618898	Agam:ENSANGP00000005722	2L	1	39359381	Flyb:CG8877-PA	2R	-1	7674443	312
Aaeg:AAEL009969-RA	supercont1.442	-1	589174	Agam:ENSANGP00000021734	2L	1	39365286	Flyb:CG8407-PA	2R	1	7669697	312
Aaeg:AAEL011871-RA	supercont1.625	-1	470322	Agam:ENSANGP00000021712	2L	1	40158932	Flyb:CG4769-PA	3L	1	5335280	420
Aaeg:AAEL011873-RA	supercont1.625	1	451505	Agam:ENSANGP00000021736	2L	-1	40163979	Flyb:Uev1A-PA	3L	-1	5338964	420
Aaeg:AAEL002349-RA	supercont1.54	1	2050096	Agam:ENSANGP00000021666	2L	-1	40191686	Flyb:CG9706-PA	3L	1	16749437	379
Aaeg:AAEL002334-RA	supercont1.54	1	2090287	Agam:ENSANGP00000021740	2L	1	40194105	Flyb:Int6-PA	3L	-1	16751350	379
Aaeg:AAEL003500-RA	supercont1.88	-1	372432	Agam:ENSANGP00000029570	2L	1	42491094	Flyb:CG13672-PA	3L	1	8229003	508
Aaeg:AAEL003498-RA	supercont1.88	-1	175633	Agam:ENSANGP00000011092	2L	1	42533128	Flyb:CG33274-PA	3L	1	8244582	508
Aaeg:AAEL007531-RA	supercont1.261	-1	256291	Agam:ENSANGP00000011176	2L	-1	42563389	Flyb:CG7201-PA	3L	-1	8265113	202
Aaeg:AAEL007525-RA	supercont1.261	-1	360083	Agam:ENSANGP00000011129	2L	-1	42577933	Flyb:Rab-RP3-PA	3L	1	8271687	202
Aaeg:AAEL008647-RA	supercont1.338	1	1085998	Agam:ENSANGP00000007588	2L	1	42680051	Flyb:nompA-PA	2R	-1	6829980	249
Aaeg:AAEL008643-RA	supercont1.338	-1	1145627	Agam:ENSANGP00000011233	2L	1	42689159	Flyb:CG7741-PA	2R	1	6820376	249
Aaeg:AAEL001193-RA	supercont1.24	1	3771035	Agam:ENSANGP00000011139	2L	-1	43077798	Flyb:CG5036-PA	2R	1	13311309	184
Aaeg:AAEL001169-RA	supercont1.24	1	3526443	Agam:ENSANGP00000007563	2L	1	43110241	Flyb:CG5033-PB	2R	1	13306199	184
Aaeg:AAEL002345-RA	supercont1.54	1	2971184	Agam:ENSANGP00000007545	2L	-1	43569537	Flyb:CG32210-PA	3L	-1	19513635	381
Aaeg:AAEL002322-RA	supercont1.54	1	2911908	Agam:ENSANGP00000018848	2L	1	43575462	Flyb:CG9300-PA	3L	1	19518840	381
Aaeg:AAEL002483-RA	supercont1.58	1	332669	Agam:ENSANGP00000027070	2L	-1	43758755	Flyb:l(2)not-PA	2R	-1	19215223	396
Aaeg:AAEL002487-RA	supercont1.58	1	635905	Agam:ENSANGP00000007528	2L	1	43798641	Flyb:CG11299-PA	2R	1	19235335	396
Aaeg:AAEL001929-RA	supercont1.46	-1	2793378	Agam:ENSANGP00000019438	2L	1	43863983	Flyb:CG9972-PA	3L	-1	2870160	329
Aaeg:AAEL001921-RA	supercont1.46	-1	2172581	Agam:ENSANGP00000029181	2L	1	44051945	Flyb:CG2083-PA	3L	-1	2777873	329
Aaeg:AAEL009352-RA	supercont1.391	-1	85614	Agam:ENSANGP00000031590	2L	-1	44101245	Flyb:CG33231-PA	3L	1	2449184	288
Aaeg:AAEL009356-RA	supercont1.391	-1	764434	Agam:ENSANGP00000029610	2L	-1	44270363	Flyb:CG15877-PA	3L	-1	2360521	288
Aaeg:AAEL011536-RA	supercont1.588	1	152962	Agam:ENSANGP00000016058	2L	-1	44370764	Flyb:CG10627-PA	3L	-1	12502781	399
Aaeg:AAEL011527-RA	supercont1.588	1	169783	Agam:ENSANGP00000016768	2L	1	44382483	Flyb:eIF-2beta-PA	3L	-1	12499827	399
Aaeg:AAEL009084-RA	supercont1.368	1	1026286	Agam:ENSANGP00000009538	2L	-1	45064245	Flyb:CG5645-PA	3L	-1	12109203	272
Aaeg:AAEL009078-RA	supercont1.368	1	1002412	Agam:ENSANGP00000016062	2L	-1	45066728	Flyb:l(3)neo18-PA	3L	-1	12111969	272
Aaeg:AAEL007454-RA	supercont1.257	1	1410897	Agam:ENSANGP00000015942	2L	1	45263252	Flyb:CG3287-PB	2R	1	2324933	200
Aaeg:AAEL007475-RA	supercont1.257	1	1438523	Agam:ENSANGP00000015977	2L	1	45267604	Flyb:CG18584-PA	2R	1	2327911	200
Aaeg:AAEL000728-RA	supercont1.15	1	316806	Agam:ENSANGP00000017871	2L	1	45632624	Flyb:S6k-PA	3L	-1	5779363	82
Aaeg:AAEL000730-RA	supercont1.15	-1	445538	Agam:ENSANGP00000022800	2L	-1	45644864	Flyb:CG10542-PA	3L	-1	5766143	82
Aaeg:AAEL007987-RA	supercont1.293	-1	1073326	Agam:ENSANGP00000017941	2L	1	46058981	Flyb:CG8583-PA	3L	1	7336415	218
Aaeg:AAEL007990-RB	supercont1.293	1	1020668	Agam:ENSANGP00000027800	2L	-1	46073329	Flyb:Sh3beta-PA	3L	-1	7342192	218
Aaeg:AAEL010112-RA	supercont1.453	1	564411	Agam:ENSANGP00000018494	2L	1	46080145	Flyb:CG30152-PA	2R	1	16186772	323
Aaeg:AAEL010097-RA	supercont1.453	1	582317	Agam:ENSANGP00000018376	2L	1	46083970	Flyb:exu-PA	2R	-1	16184339	323
Aaeg:AAEL010113-RA	supercont1.453	1	878642	Agam:ENSANGP00000028160	2L	1	46133767	Flyb:CG5928-PA	X	1	5913850	324
Aaeg:AAEL010102-RA	supercont1.453	-1	904042	Agam:ENSANGP00000017817	2L	-1	46137164	Flyb:Tsp5D-PA	X	-1	5916148	324
Aaeg:AAEL007988-RA	supercont1.293	1	857070	Agam:ENSANGP00000009486	2L	1	46180424	Flyb:CG3911-PA	3L	-1	9414512	217
Aaeg:AAEL008005-RA	supercont1.293	-1	871796	Agam:ENSANGP00000017862	2L	-1	46184611	Flyb:MTF-1-PB	3L	1	9411011	217
Aaeg:AAEL001400-RA	supercont1.32	1	3038632	Agam:ENSANGP00000018390	2L	-1	46316981	Flyb:CG33785-PA	2R	-1	16158388	236
Aaeg:AAEL001424-RA	supercont1.32	-1	3043320	Agam:ENSANGP00000018428	2L	-1	46318187	Flyb:CG11110-PA	2R	1	16156988	236
Aaeg:AAEL001437-RA	supercont1.32	-1	1099823	Agam:ENSANGP00000019058	2L	1	46509211	Flyb:CG13188-PA	2R	1	7474042	235
Aaeg:AAEL001422-RA	supercont1.32	1	1009777	Agam:ENSANGP00000019186	2L	-1	46526728	Flyb:CG8979-PB	2R	-1	7483899	235
Aaeg:AAEL006224-RA	supercont1.195	1	361091	Agam:ENSANGP00000019038	2L	1	46826081	Flyb:CG10672-PA	3L	-1	5114959	126
Aaeg:AAEL006221-RA	supercont1.195	-1	364201	Agam:ENSANGP00000019137	2L	-1	46827113	Flyb:CG10673-PA	3L	-1	5112965	126
Aaeg:AAEL009285-RA	supercont1.387	1	814233	Agam:ENSANGP00000019143	2L	1	47003986	Flyb:CG32344-PA	3L	-1	306825	284
Aaeg:AAEL009294-RA	supercont1.387	-1	345993	Agam:ENSANGP00000009420	2L	1	47104504	Flyb:fwd-PC	3L	-1	292353	284
Aaeg:AAEL005335-RA	supercont1.151	-1	1019597	Agam:ENSANGP00000011039	2L	1	47570144	Flyb:CG15822-PC	3L	-1	2141334	86
Aaeg:AAEL005324-RA	supercont1.151	-1	547375	Agam:ENSANGP00000009384	2L	1	47647135	Flyb:sls-PC	3L	-1	2060873	86
Aaeg:AAEL008491-RA	supercont1.328	-1	891073	Agam:ENSANGP00000027428	2L	1	47794040	Flyb:CG8270-PA	3L	1	6463802	241
Aaeg:AAEL008475-RA	supercont1.328	1	851218	Agam:ENSANGP00000010832	2L	-1	47798906	Flyb:CG10144-PA	3L	-1	6467202	241
Aaeg:AAEL008476-RA	supercont1.328	1	906152	Agam:ENSANGP00000010966	2L	1	47802173	Flyb:CG8616-PA	3L	1	7213345	242
Aaeg:AAEL008481-RA	supercont1.328	-1	928446	Agam:ENSANGP00000010955	2L	-1	47803721	Flyb:RpL18-PA	3L	-1	7214713	242
Aaeg:AAEL001563-RA	supercont1.36	1	2651027	Agam:ENSANGP00000009356	2L	-1	48095804	Flyb:CG3579-PA	2R	1	20115547	268
Aaeg:AAEL001562-RA	supercont1.36	-1	2636913	Agam:ENSANGP00000030878	2L	1	48098392	Flyb:CG13588-PA	2R	1	20117337	268
Aaeg:AAEL001559-RA	supercont1.36	-1	2316541	Agam:ENSANGP00000010853	2L	1	48132286	Flyb:mos-PA	2R	-1	8268206	267
Aaeg:AAEL001564-RA	supercont1.36	1	2298916	Agam:ENSANGP00000010939	2L	-1	48136075	Flyb:tafazzin-PA	2R	-1	8270592	267
Aaeg:AAEL001565-RA	supercont1.36	-1	2077221	Agam:ENSANGP00000009346	2L	1	48176808	Flyb:CG12130-PA	2R	1	5473595	266
Aaeg:AAEL001567-RA	supercont1.36	-1	1795556	Agam:ENSANGP00000029036	2L	1	48225418	Flyb:Mef2-PC	2R	-1	5431019	266
Aaeg:AAEL001584-RA	supercont1.36	-1	1044158	Agam:ENSANGP00000010824	2L	1	48331797	Flyb:pwn-PA	2R	1	2809666	265
Aaeg:AAEL001554-RA	supercont1.36	-1	987060	Agam:ENSANGP00000028929	2L	-1	48338121	Flyb:CG1845-PA	2R	-1	2787391	265
Aaeg:AAEL005171-RA	supercont1.145	-1	1926499	Agam:ENSANGP00000021553	2L	-1	48385256	Flyb:CG11722-PA	3R	-1	5870744	78
Aaeg:AAEL005208-RA	supercont1.145	1	1920902	Agam:ENSANGP00000025955	2L	1	48386605	Flyb:CG3909-PA	3R	1	5869682	78
Aaeg:AAEL005186-RA	supercont1.145	-1	1847464	Agam:ENSANGP00000021530	2L	1	48468589	Flyb:CG3280-PA	3L	1	9582809	77
Aaeg:AAEL005187-RA	supercont1.145	-1	1836448	Agam:ENSANGP00000021549	2L	1	48479556	Flyb:LanB2-PA	3L	1	9594264	77
Aaeg:AAEL005197-RA	supercont1.145	1	1779475	Agam:ENSANGP00000021537	2L	-1	48512708	Flyb:CG8707-PA	2R	-1	3674428	76
Aaeg:AAEL005175-RA	supercont1.145	-1	1758634	Agam:ENSANGP00000009316	2L	1	48532211	Flyb:CG8709-PA	2R	-1	3652343	76
Aaeg:AAEL006879-RB	supercont1.225	1	1322052	Agam:ENSANGP00000009305	2L	1	48764190	Flyb:CG8026-PB	2R	-1	4701536	169
Aaeg:AAEL006880-RC	supercont1.225	1	1429579	Agam:ENSANGP00000021516	2L	1	48772659	Flyb:ltd-PB	2R	-1	4691610	169
Aaeg:AAEL011591-RA	supercont1.592	1	703024	Agam:ENSANGP00000020741	2L	-1	48958401	Flyb:CG9975-PA	2R	1	14858066	403
Aaeg:AAEL011588-RA	supercont1.592	1	582678	Agam:ENSANGP00000028746	2L	-1	48971745	Flyb:CG34045-PA	2R	1	14848810	403
Aaeg:AAEL003487-RA	supercont1.87	-1	2472068	Agam:ENSANGP00000020738	2L	1	49331360	Flyb:CG30372-PB	2R	-1	3630640	507
Aaeg:AAEL003466-RA	supercont1.87	1	2428834	Agam:ENSANGP00000021534	2L	1	49338868	Flyb:cul-4-PA	2R	-1	3616144	507
Aaeg:AAEL006501-RA	supercont1.208	-1	1698326	Agam:ENSANGP00000004127	2R	-1	678475	Flyb:CG14549-PA	3R	-1	21881812	142
Aaeg:AAEL006502-RA	supercont1.208	1	1675248	Agam:ENSANGP00000012114	2R	1	679808	Flyb:CG14543-PA	3R	1	21882703	142
Aaeg:AAEL006492-RA	supercont1.208	-1	1281920	Agam:ENSANGP00000012004	2R	-1	732312	Flyb:CBP-PA	X	1	7184996	141
Aaeg:AAEL006487-RA	supercont1.208	1	688396	Agam:ENSANGP00000011955	2R	-1	822057	Flyb:CG9657-PA	X	1	7265358	141
Aaeg:AAEL005622-RA	supercont1.165	1	283946	Agam:ENSANGP00000013986	2R	1	1496853	Flyb:CG32036-PB	3L	-1	9462664	102
Aaeg:AAEL005624-RA	supercont1.165	1	233768	Agam:ENSANGP00000029263	2R	-1	1528825	Flyb:CG32037-PA	3L	-1	9464929	102
Aaeg:AAEL005617-RA	supercont1.164	1	112098	Agam:ENSANGP00000024060	2R	-1	2061958	Flyb:UGP-PA	3L	-1	9328635	101
Aaeg:AAEL005601-RA	supercont1.164	1	59986	Agam:ENSANGP00000031485	2R	-1	2065957	Flyb:CG32039-PA	3L	1	9333253	101
Aaeg:AAEL001324-RA	supercont1.30	1	1280847	Agam:ENSANGP00000020306	2R	-1	2507238	Flyb:Gnf1-PB	3R	1	734040	224
Aaeg:AAEL001344-RA	supercont1.30	1	956766	Agam:ENSANGP00000009802	2R	-1	2570685	Flyb:opa-PA	3R	1	686855	224
Aaeg:AAEL001340-RA	supercont1.30	1	553004	Agam:ENSANGP00000020337	2R	-1	2621733	Flyb:CG17387-PA	3R	-1	608701	223
Aaeg:AAEL001349-RA	supercont1.30	-1	527954	Agam:ENSANGP00000009800	2R	1	2624856	Flyb:CG14655-PA	3R	-1	604674	223
Aaeg:AAEL006922-RA	supercont1.227	1	641499	Agam:ENSANGP00000020389	2R	1	2867940	Flyb:Chd64-PB	3L	-1	4102124	170
Aaeg:AAEL006911-RA	supercont1.227	1	535360	Agam:ENSANGP00000025312	2R	-1	2889405	Flyb:CG14998-PC	3L	-1	4113202	170
Aaeg:AAEL008041-RA	supercont1.297	1	1022298	Agam:ENSANGP00000022498	2R	1	3327492	Flyb:CG1440-PA	X	1	8284260	220
Aaeg:AAEL008038-RA	supercont1.297	-1	1037231	Agam:ENSANGP00000016862	2R	-1	3330841	Flyb:CG12123-PA	X	-1	8287005	220
Aaeg:AAEL008818-RA	supercont1.349	-1	983853	Agam:ENSANGP00000017566	2R	-1	3368433	Flyb:org-1-PA	X	-1	8296501	262
Aaeg:AAEL008788-RA	supercont1.349	-1	910391	Agam:ENSANGP00000016921	2R	1	3376358	Flyb:Es2-PA	X	1	8307629	262
Aaeg:AAEL004696-RA	supercont1.127	1	1932533	Agam:ENSANGP00000016774	2R	-1	4121698	Flyb:dmrt93B-PA	3R	1	16901123	51
Aaeg:AAEL004707-RA	supercont1.127	-1	1794315	Agam:ENSANGP00000017511	2R	1	4138780	Flyb:CG7056-PA	3R	-1	16904445	51
Aaeg:AAEL002869-RA	supercont1.70	1	1716604	Agam:ENSANGP00000015804	2R	-1	4665675	Flyb:CG31195-PA	3R	-1	16586109	446
Aaeg:AAEL002879-RA	supercont1.70	-1	1433119	Agam:ENSANGP00000023687	2R	1	4707420	Flyb:CG17838-PD	3R	1	16623181	446
Aaeg:AAEL008661-RA	supercont1.339	1	1055618	Agam:ENSANGP00000009675	2R	-1	5150061	Flyb:SNF4Agamma-PA	3R	1	17009447	251
Aaeg:AAEL008656-RA	supercont1.339	1	825204	Agam:ENSANGP00000015764	2R	-1	5216048	Flyb:CG5802-PA	3R	1	16965170	251
Aaeg:AAEL008587-RA	supercont1.333	1	433214	Agam:ENSANGP00000011536	2R	1	5392474	Flyb:Nmdar1-PA	3R	-1	1338806	247
Aaeg:AAEL008585-RA	supercont1.333	1	626030	Agam:ENSANGP00000009647	2R	-1	5414115	Flyb:ksr-PA	3R	-1	1307910	247
Aaeg:AAEL007306-RA	supercont1.247	-1	381427	Agam:ENSANGP00000023605	2R	-1	5652893	Flyb:Actn-PC	X	-1	1886462	190
Aaeg:AAEL007280-RA	supercont1.247	1	465294	Agam:ENSANGP00000009636	2R	-1	5686680	Flyb:CG4281-PA	X	-1	1920020	190
Aaeg:AAEL008111-RA	supercont1.301	1	609552	Agam:ENSANGP00000023723	2R	1	5696566	Flyb:CG14141-PA	3L	1	11175679	225
Aaeg:AAEL008099-RA	supercont1.301	-1	658082	Agam:ENSANGP00000011729	2R	-1	5702601	Flyb:CG6199-PA	3L	-1	11176067	225
Aaeg:AAEL009442-RA	supercont1.396	-1	147650	Agam:ENSANGP00000030622	2R	1	6028329	Flyb:A3-3-PA	X	-1	1105878	290
Aaeg:AAEL009438-RA	supercont1.396	1	45923	Agam:ENSANGP00000009606	2R	-1	6041755	Flyb:CG11403-PA	X	-1	1095251	290
Aaeg:AAEL004633-RA	supercont1.125	1	1394966	Agam:ENSANGP00000012202	2R	1	9094626	Flyb:nct-PA	3R	1	20678663	45
Aaeg:AAEL004639-RA	supercont1.125	1	1424132	Agam:ENSANGP00000011632	2R	-1	9098759	Flyb:CG31119-PA	3R	-1	20681370	45
Aaeg:AAEL004643-RA	supercont1.125	-1	1442811	Agam:ENSANGP00000011582	2R	1	9102855	Flyb:mRpL1-PA	3R	1	4127820	46
Aaeg:AAEL004648-RA	supercont1.125	-1	1890813	Agam:ENSANGP00000012217	2R	-1	9168603	Flyb:ato-PA	3R	1	4104315	46
Aaeg:AAEL002701-RA	supercont1.65	1	1857225	Agam:ENSANGP00000013320	2R	1	9285166	Flyb:CG11999-PA	3R	-1	1179956	431
Aaeg:AAEL002705-RA	supercont1.65	1	2310090	Agam:ENSANGP00000008480	2R	1	9365053	Flyb:l(3)82Fd-PG	3R	-1	1115569	431
Aaeg:AAEL002756-RA	supercont1.67	-1	2456694	Agam:ENSANGP00000018546	2R	1	10605186	Flyb:SytIV-PA	3R	1	3093803	436
Aaeg:AAEL002760-RA	supercont1.67	1	2433200	Agam:ENSANGP00000018352	2R	-1	10608992	Flyb:CG10050-PA	3R	1	3076007	436
Aaeg:AAEL010061-RA	supercont1.450	-1	315197	Agam:ENSANGP00000007922	2R	1	12082585	Flyb:form3-PA	3L	1	7091066	319
Aaeg:AAEL010054-RA	supercont1.450	1	210408	Agam:ENSANGP00000020174	2R	1	12094281	Flyb:msl-3-PA	3L	-1	7098426	319
Aaeg:AAEL003384-RA	supercont1.85	1	1184271	Agam:ENSANGP00000025632	2R	1	12680483	Flyb:CG14671-PA	3R	-1	1390182	498
Aaeg:AAEL003363-RA	supercont1.85	-1	1192563	Agam:ENSANGP00000019070	2R	1	12681622	Flyb:CG12746-PC	3R	1	1392081	498
Aaeg:AAEL004142-RA	supercont1.108	-1	1817199	Agam:ENSANGP00000007886	2R	-1	12799336	Flyb:CG4845-PA	3R	1	15849832	18
Aaeg:AAEL004143-RA	supercont1.108	1	1860152	Agam:ENSANGP00000007885	2R	1	12805561	Flyb:CG4433-PB	3R	-1	15845657	18
Aaeg:AAEL004141-RA	supercont1.108	-1	1743058	Agam:ENSANGP00000022805	2R	1	12823634	Flyb:vib-PA	3R	-1	15047685	17
Aaeg:AAEL004146-RA	supercont1.108	1	1664895	Agam:ENSANGP00000019076	2R	-1	12838769	Flyb:cry-PA	2L	1	11945321	17
Aaeg:AAEL004146-RA	supercont1.108	1	1664895	Agam:ENSANGP00000019076	2R	-1	12838769	Flyb:cry-PA	3R	1	15039572	17
Aaeg:AAEL012816-RA	supercont1.744	1	259481	Agam:ENSANGP00000018446	2R	1	13019491	Flyb:CG6353-PA	3R	-1	17488070	456
Aaeg:AAEL012817-RA	supercont1.744	1	323892	Agam:ENSANGP00000030193	2R	1	13040497	Flyb:E2f-PC	3R	-1	17449756	456
Aaeg:AAEL006061-RA	supercont1.187	1	473032	Agam:ENSANGP00000011336	2R	-1	13319002	Flyb:Pros25-PA	3R	1	8257671	120
Aaeg:AAEL006051-RA	supercont1.187	-1	480772	Agam:ENSANGP00000007857	2R	1	13320306	Flyb:Scgbeta-PA	3R	-1	8247537	120
Aaeg:AAEL008039-RA	supercont1.297	1	1360086	Agam:ENSANGP00000030584	2R	1	13890575	Flyb:CG13704-PA	3L	1	4880691	221
Aaeg:AAEL008046-RA	supercont1.297	1	1379305	Agam:ENSANGP00000007850	2R	1	13893959	Flyb:Rh50-PA	3L	1	4895623	221
Aaeg:AAEL010051-RA	supercont1.449	1	239304	Agam:ENSANGP00000019865	2R	1	14729893	Flyb:CG13850-PA	3R	-1	18235480	317
Aaeg:AAEL010044-RA	supercont1.449	-1	267510	Agam:ENSANGP00000007796	2R	-1	14734339	Flyb:CG13855-PA	3R	1	18232998	317
Aaeg:AAEL013314-RA	supercont1.821	1	369193	Agam:ENSANGP00000017657	2R	-1	15704023	Flyb:CG3226-PA	X	-1	6498930	488
Aaeg:AAEL013309-RC	supercont1.821	1	303431	Agam:ENSANGP00000017579	2R	-1	15713910	Flyb:Ctr1A-PA	X	1	6511282	488
Aaeg:AAEL005099-RA	supercont1.141	1	819147	Agam:ENSANGP00000028388	2R	-1	15798644	Flyb:CG18646-PA	X	1	12905798	72
Aaeg:AAEL005089-RA	supercont1.141	1	477817	Agam:ENSANGP00000017576	2R	-1	15889719	Flyb:CG15720-PA	X	1	12866659	72
Aaeg:AAEL005510-RA	supercont1.160	-1	293909	Agam:ENSANGP00000006322	2R	1	16893878	Flyb:CG6420-PA	3R	-1	22548473	97
Aaeg:AAEL005500-RA	supercont1.160	1	169961	Agam:ENSANGP00000019342	2R	1	16900757	Flyb:CG5484-PC	3R	1	22544509	97
Aaeg:AAEL012249-RA	supercont1.671	1	160771	Agam:ENSANGP00000006313	2R	1	17208400	Flyb:CG6184-PA	3R	-1	15480195	438
Aaeg:AAEL012250-RA	supercont1.671	1	198167	Agam:ENSANGP00000013421	2R	-1	17213157	Flyb:CG6195-PA	3R	-1	15473354	438
Aaeg:AAEL012764-RA	supercont1.738	-1	260238	Agam:ENSANGP00000029416	2R	-1	17492942	Flyb:CG6188-PA	3R	1	8501047	454
Aaeg:AAEL012768-RA	supercont1.738	-1	302392	Agam:ENSANGP00000027531	2R	-1	17505759	Flyb:CG14395-PA	3R	1	8496924	454
Aaeg:AAEL002727-RA	supercont1.65	1	2746374	Agam:ENSANGP00000013418	2R	1	17775366	Flyb:CG31187-PA	3R	1	3673085	432
Aaeg:AAEL002703-RB	supercont1.65	-1	2800805	Agam:ENSANGP00000013516	2R	-1	17788072	Flyb:CG31472-PB	3R	1	3636866	432
Aaeg:AAEL010806-RA	supercont1.509	1	6923	Agam:ENSANGP00000021670	2R	1	18059432	Flyb:CG4210-PB	3R	1	11040189	359
Aaeg:AAEL010796-RA	supercont1.509	1	66443	Agam:ENSANGP00000021863	2R	1	18065967	Flyb:CG6623-PA	3R	-1	11042542	359
Aaeg:AAEL004132-RA	supercont1.108	-1	2538985	Agam:ENSANGP00000021911	2R	1	18232841	Flyb:MED31-PB	3R	1	468544	19
Aaeg:AAEL004145-RA	supercont1.108	1	2395261	Agam:ENSANGP00000026512	2R	-1	18254228	Flyb:CG18271-PA	3R	1	469683	19
Aaeg:AAEL011571-RA	supercont1.590	1	25867	Agam:ENSANGP00000021675	2R	-1	18508832	Flyb:Gr66a-PA	3L	-1	8280111	402
Aaeg:AAEL011576-RA	supercont1.590	1	7286	Agam:ENSANGP00000021819	2R	-1	18511718	Flyb:CG7066-PA	3L	1	8278666	402
Aaeg:AAEL010003-RA	supercont1.446	-1	383530	Agam:ENSANGP00000020666	2R	-1	19053301	Flyb:CG4980-PA	3R	-1	23747545	314
Aaeg:AAEL009994-RA	supercont1.446	1	387406	Agam:ENSANGP00000020662	2R	1	19055423	Flyb:RpL4-PA	3R	1	23749574	314
Aaeg:AAEL008416-RA	supercont1.323	1	767941	Agam:ENSANGP00000020655	2R	1	19058294	Flyb:Prp18-PA	3R	-1	14856405	239
Aaeg:AAEL008418-RB	supercont1.323	1	703034	Agam:ENSANGP00000020661	2R	-1	19059505	Flyb:P5cr-PA	3R	1	14855341	239
Aaeg:AAEL007574-RA	supercont1.264	-1	621940	Agam:ENSANGP00000020657	2R	1	19231860	Flyb:CG31033-PC	3R	-1	25656926	203
Aaeg:AAEL007579-RA	supercont1.264	1	530998	Agam:ENSANGP00000001329	2R	-1	19236535	Flyb:CG7802-PA	3R	1	25649526	203
Aaeg:AAEL005163-RA	supercont1.144	1	656389	Agam:ENSANGP00000001317	2R	-1	19952415	Flyb:CG7006-PA	3R	1	20676732	74
Aaeg:AAEL005160-RA	supercont1.144	1	582294	Agam:ENSANGP00000015362	2R	-1	19955474	Flyb:Esp-PA	3R	1	20674456	74
Aaeg:AAEL013460-RA	supercont1.848	1	173513	Agam:ENSANGP00000001286	2R	1	20574555	Flyb:CG11727-PB	X	-1	11282047	497
Aaeg:AAEL013458-RC	supercont1.848	1	245216	Agam:ENSANGP00000014914	2R	1	20590569	Flyb:Gs2-PC	X	1	11272167	497
Aaeg:AAEL003922-RA	supercont1.100	-1	634202	Agam:ENSANGP00000014779	2R	-1	20870483	Flyb:CG1074-PA	3R	1	260776	4
Aaeg:AAEL003911-RA	supercont1.100	-1	660046	Agam:ENSANGP00000014850	2R	-1	20873511	Flyb:CG14650-PA	3R	1	264960	4
Aaeg:AAEL007809-RA	supercont1.283	1	1217264	Agam:ENSANGP00000014804	2R	1	21070414	Flyb:Alg10-PA	3L	1	11139756	212
Aaeg:AAEL007806-RA	supercont1.283	1	1181687	Agam:ENSANGP00000014790	2R	-1	21073281	Flyb:CG14142-PA	3L	1	11148650	212
Aaeg:AAEL001148-RA	supercont1.23	1	101780	Agam:ENSANGP00000021908	2R	1	21954654	Flyb:CG32532-PA	X	-1	19373198	173
Aaeg:AAEL001126-RA	supercont1.23	1	256585	Agam:ENSANGP00000022129	2R	-1	21963978	Flyb:CG33525-PF	X	1	19360362	173
Aaeg:AAEL006845-RB	supercont1.223	1	138652	Agam:ENSANGP00000021872	2R	1	22170305	Flyb:CG6480-PA	3L	-1	20230215	165
Aaeg:AAEL006847-RA	supercont1.223	-1	171657	Agam:ENSANGP00000024291	2R	-1	22173632	Flyb:CG6597-PB	3L	1	20239869	165
Aaeg:AAEL008248-RA	supercont1.309	1	371675	Agam:ENSANGP00000022093	2R	1	22362261	Flyb:CG7414-PA	3L	1	21760122	227
Aaeg:AAEL008249-RB	supercont1.309	-1	404646	Agam:ENSANGP00000025872	2R	-1	22363664	Flyb:CG32448-PA	3L	-1	21762054	227
Aaeg:AAEL006918-RB	supercont1.227	1	928586	Agam:ENSANGP00000024843	2R	1	22482198	Flyb:CG10038-PA	3R	-1	8175515	171
Aaeg:AAEL006924-RA	supercont1.227	-1	1028535	Agam:ENSANGP00000022193	2R	-1	22499298	Flyb:CG10014-PA	3R	1	8048943	171
Aaeg:AAEL005699-RA	supercont1.170	1	1926921	Agam:ENSANGP00000002975	2R	1	23002453	Flyb:TMS1-PA	3L	1	16379259	106
Aaeg:AAEL005688-RA	supercont1.170	-1	1939019	Agam:ENSANGP00000012789	2R	-1	23004303	Flyb:CG4573-PA	3L	-1	16381511	106
Aaeg:AAEL004212-RA	supercont1.110	-1	1183357	Agam:ENSANGP00000012086	2R	-1	23102080	Flyb:CG2471-PA	X	-1	11757050	25
Aaeg:AAEL004211-RA	supercont1.110	-1	1280363	Agam:ENSANGP00000012170	2R	-1	23120572	Flyb:CG10362-PA	X	-1	11762569	25
Aaeg:AAEL009565-RA	supercont1.407	-1	376292	Agam:ENSANGP00000026102	2R	1	23651692	Flyb:pxb-PB	3R	1	11505668	298
Aaeg:AAEL009564-RA	supercont1.407	1	151320	Agam:ENSANGP00000010554	2R	-1	23696246	Flyb:CG4520-PA	3R	1	11571089	298
Aaeg:AAEL012448-RA	supercont1.697	-1	229960	Agam:ENSANGP00000028166	2R	-1	25204030	Flyb:CG9578-PA	X	1	20004544	445
Aaeg:AAEL012439-RA	supercont1.697	1	285859	Agam:ENSANGP00000021099	2R	1	25209374	Flyb:CG9577-PA	X	1	20001053	445
Aaeg:AAEL012997-RA	supercont1.773	-1	362645	Agam:ENSANGP00000010779	2R	-1	26002360	Flyb:CG2278-PA	X	-1	8014162	469
Aaeg:AAEL012999-RA	supercont1.773	-1	468125	Agam:ENSANGP00000010749	2R	-1	26010834	Flyb:slpr-PA	X	-1	8019194	469
Aaeg:AAEL000415-RA	supercont1.8	1	3694000	Agam:ENSANGP00000010831	2R	-1	26173898	Flyb:CG9009-PA	X	-1	14776553	478
Aaeg:AAEL000466-RA	supercont1.8	-1	3535657	Agam:ENSANGP00000002689	2R	1	26214976	Flyb:eag-PA	X	1	14822424	478
Aaeg:AAEL000807-RA	supercont1.17	-1	1014869	Agam:ENSANGP00000022059	2R	1	26671153	Flyb:CG8286-PA	3R	1	5414043	105
Aaeg:AAEL000838-RA	supercont1.17	-1	679382	Agam:ENSANGP00000022056	2R	1	26744601	Flyb:CG8312-PA	3R	1	5448801	105
Aaeg:AAEL005906-RA	supercont1.179	-1	658085	Agam:ENSANGP00000022018	2R	1	27198997	Flyb:Sb-PA	3R	1	11968025	112
Aaeg:AAEL005897-RA	supercont1.179	1	512798	Agam:ENSANGP00000022131	2R	-1	27238334	Flyb:CG5903-PA	3R	-1	11971926	112
Aaeg:AAEL009174-RA	supercont1.376	-1	468640	Agam:ENSANGP00000016809	2R	1	27656961	Flyb:GlcAT-I-PA	X	1	3977013	276
Aaeg:AAEL009173-RA	supercont1.376	1	401268	Agam:ENSANGP00000016208	2R	1	27752387	Flyb:Fas2-PC	X	-1	4017640	276
Aaeg:AAEL006085-RA	supercont1.188	-1	215465	Agam:ENSANGP00000016878	2R	-1	28078544	Flyb:pug-PC	3R	1	6527185	121
Aaeg:AAEL006065-RA	supercont1.188	1	168607	Agam:ENSANGP00000016999	2R	1	28087182	Flyb:CG14683-PB	3R	1	6524129	121
Aaeg:AAEL013105-RA	supercont1.790	-1	49740	Agam:ENSANGP00000016184	2R	-1	28096528	Flyb:Ptp99A-PC	3R	1	25298999	473
Aaeg:AAEL013106-RA	supercont1.790	-1	216294	Agam:ENSANGP00000029748	2R	-1	28111773	Flyb:CG11516-PA	3R	1	25253449	473
Aaeg:AAEL005723-RA	supercont1.171	1	1913058	Agam:ENSANGP00000016767	2R	1	28209418	Flyb:CG14442-PA	X	-1	6537117	108
Aaeg:AAEL005725-RA	supercont1.171	1	1924237	Agam:ENSANGP00000016926	2R	1	28212143	Flyb:CG3184-PA	X	-1	6533442	108
Aaeg:AAEL005945-RA	supercont1.181	1	310358	Agam:ENSANGP00000018804	2R	1	28809998	Flyb:Octbeta2R-PA	3R	-1	8382663	114
Aaeg:AAEL005952-RA	supercont1.181	-1	635479	Agam:ENSANGP00000018662	2R	-1	28852800	Flyb:Octbeta3R-PB	3R	-1	8343342	114
Aaeg:AAEL005950-RA	supercont1.181	-1	1227548	Agam:ENSANGP00000018612	2R	-1	28947201	Flyb:CG31116-PD	3R	-1	7627621	115
Aaeg:AAEL005947-RB	supercont1.181	-1	1415224	Agam:ENSANGP00000018680	2R	-1	28975336	Flyb:CG6946-PA	3R	-1	7642945	115
Aaeg:AAEL011960-RA	supercont1.638	-1	142268	Agam:ENSANGP00000010910	2R	1	30134957	Flyb:CG2691-PA	X	-1	13455872	428
Aaeg:AAEL011962-RA	supercont1.638	1	104135	Agam:ENSANGP00000010867	2R	-1	30137966	Flyb:CG11176-PA	X	1	13452179	428
Aaeg:AAEL000816-RA	supercont1.17	1	175907	Agam:ENSANGP00000029115	2R	1	30640114	Flyb:CG11967-PA	3R	1	4807549	104
Aaeg:AAEL000826-RA	supercont1.17	1	522895	Agam:ENSANGP00000017592	2R	-1	30669868	Flyb:CG11966-PA	3R	-1	4778677	104
Aaeg:AAEL013612-RA	supercont1.886	1	298149	Agam:ENSANGP00000018251	2R	1	31241922	Flyb:CG9572-PA	X	1	19985719	509
Aaeg:AAEL013620-RA	supercont1.886	-1	329057	Agam:ENSANGP00000018202	2R	-1	31247275	Flyb:Rab35-PA	X	-1	19992203	509
Aaeg:AAEL014368-RA	supercont1.1091	-1	227417	Agam:ENSANGP00000017640	2R	1	31282365	Flyb:Bin1-PA	3R	-1	12012238	22
Aaeg:AAEL014369-RA	supercont1.1091	1	205904	Agam:ENSANGP00000017609	2R	-1	31284102	Flyb:CG8927-PB	3R	1	12009223	22
Aaeg:AAEL002422-RA	supercont1.56	-1	2879987	Agam:ENSANGP00000031931	2R	1	32286756	Flyb:orb-PE	3R	-1	19092570	387
Aaeg:AAEL002433-RA	supercont1.56	1	2795204	Agam:ENSANGP00000020369	2R	-1	32298746	Flyb:CG13827-PA	3R	1	19085173	387
Aaeg:AAEL006788-RA	supercont1.221	-1	1718058	Agam:ENSANGP00000020452	2R	1	32416138	Flyb:CG8142-PA	X	-1	17677958	163
Aaeg:AAEL006789-RA	supercont1.221	1	1726010	Agam:ENSANGP00000020370	2R	-1	32417408	Flyb:e(y)1-PA	X	1	17676644	163
Aaeg:AAEL008367-RA	supercont1.320	1	378148	Agam:ENSANGP00000016706	2R	1	33121337	Flyb:CG14715-PA	3R	1	7500242	237
Aaeg:AAEL008363-RB	supercont1.320	-1	382988	Agam:ENSANGP00000016676	2R	-1	33122034	Flyb:Taf12-PC	3R	-1	7504606	237
Aaeg:AAEL002130-RA	supercont1.49	1	2003508	Agam:ENSANGP00000016656	2R	-1	33184994	Flyb:ImpL2-PA	3L	-1	4213906	347
Aaeg:AAEL002107-RA	supercont1.49	-1	1817829	Agam:ENSANGP00000016556	2R	1	33204115	Flyb:CG14997-PA	3L	1	4224958	347
Aaeg:AAEL000084-RA	supercont1.1	-1	260173	Agam:ENSANGP00000030526	2R	1	33392504	Flyb:Elongin-B-PA	3R	-1	16404790	2
Aaeg:AAEL000016-RA	supercont1.1	1	229510	Agam:ENSANGP00000016674	2R	-1	33394150	Flyb:CG5412-PA	3R	1	16403308	2
Aaeg:AAEL012612-RA	supercont1.717	1	521851	Agam:ENSANGP00000014786	2R	1	33545530	Flyb:CG11870-PC	3R	1	6121240	451
Aaeg:AAEL012613-RA	supercont1.717	1	555429	Agam:ENSANGP00000014746	2R	1	33560903	Flyb:CG11872-PA	3R	1	6131025	451
Aaeg:AAEL011780-RA	supercont1.612	1	228977	Agam:ENSANGP00000014707	2R	1	33732487	Flyb:CG7003-PA	3L	-1	15121836	416
Aaeg:AAEL011784-RA	supercont1.612	-1	252272	Agam:ENSANGP00000014791	2R	-1	33736060	Flyb:FucTA-PA	3L	1	15117287	416
Aaeg:AAEL011776-RA	supercont1.612	-1	337633	Agam:ENSANGP00000014748	2R	-1	33742572	Flyb:Snap-PA	3L	1	20248509	417
Aaeg:AAEL011777-RA	supercont1.612	1	390734	Agam:ENSANGP00000014699	2R	-1	33745846	Flyb:CG6680-PA	3L	1	20252671	417
Aaeg:AAEL000217-RA	supercont1.3	-1	1270004	Agam:ENSANGP00000003262	2R	-1	33799472	Flyb:Tao-1-PE	X	-1	19408476	222
Aaeg:AAEL000214-RA	supercont1.3	1	1225798	Agam:ENSANGP00000014711	2R	-1	33814374	Flyb:car-PA	X	1	19401265	222
Aaeg:AAEL014377-RA	supercont1.1094	1	224970	Agam:ENSANGP00000029742	2R	1	33992646	Flyb:nbs-PB	3L	-1	9695915	23
Aaeg:AAEL014376-RA	supercont1.1094	-1	228759	Agam:ENSANGP00000014796	2R	-1	33995298	Flyb:CG14174-PA	3L	1	9693839	23
Aaeg:AAEL006172-RA	supercont1.193	-1	90692	Agam:ENSANGP00000014727	2R	-1	34393201	Flyb:Atu-PA	3R	1	1440386	125
Aaeg:AAEL006188-RC	supercont1.193	1	55739	Agam:ENSANGP00000012946	2R	1	34602407	Flyb:Spec2-PA	3R	-1	1443907	125
Aaeg:AAEL006806-RA	supercont1.221	1	1150654	Agam:ENSANGP00000012934	2R	-1	34897183	Flyb:CG31183-PA	3R	-1	11689915	162
Aaeg:AAEL006807-RA	supercont1.221	1	955702	Agam:ENSANGP00000012947	2R	-1	34947752	Flyb:CG14877-PA	3R	-1	11715378	162
Aaeg:AAEL013337-RA	supercont1.825	-1	307404	Agam:ENSANGP00000000751	2R	-1	37405924	Flyb:CG14367-PA	3R	1	9520368	490
Aaeg:AAEL013334-RA	supercont1.825	-1	369829	Agam:ENSANGP00000014916	2R	-1	37413569	Flyb:flfl-PC	3R	1	9515519	490
Aaeg:AAEL003161-RA	supercont1.80	1	1528560	Agam:ENSANGP00000000753	2R	1	37430277	Flyb:CG17273-PA	3R	-1	16653516	479
Aaeg:AAEL003158-RA	supercont1.80	-1	1573445	Agam:ENSANGP00000014867	2R	-1	37439112	Flyb:CG15696-PA	3R	1	16673101	479
Aaeg:AAEL002554-RB	supercont1.60	-1	2299201	Agam:ENSANGP00000014215	2R	-1	37767267	Flyb:kal-1-PA	3R	1	19972018	410
Aaeg:AAEL002548-RA	supercont1.60	-1	2454427	Agam:ENSANGP00000013588	2R	-1	37842384	Flyb:Tsc1-PA	3R	1	19958218	410
Aaeg:AAEL009915-RA	supercont1.437	-1	709337	Agam:ENSANGP00000000794	2R	-1	37856734	Flyb:CG6129-PC	3R	1	19951368	306
Aaeg:AAEL009899-RA	supercont1.437	1	815127	Agam:ENSANGP00000031408	2R	1	37878581	Flyb:CG13607-PA	3R	-1	19940979	306
Aaeg:AAEL010481-RA	supercont1.480	1	798129	Agam:ENSANGP00000019756	2R	1	38642786	Flyb:CG1208-PA	3R	1	1660774	341
Aaeg:AAEL010479-RA	supercont1.480	1	859402	Agam:ENSANGP00000024113	2R	1	38652764	Flyb:CG1213-PB	3R	1	1671205	341
Aaeg:AAEL004613-RA	supercont1.125	-1	1943731	Agam:ENSANGP00000010460	2R	-1	39072098	Flyb:CG5706-PA	3R	-1	20077262	47
Aaeg:AAEL004651-RA	supercont1.125	1	2076754	Agam:ENSANGP00000026224	2R	1	39092215	Flyb:mask-PA	3R	1	20065589	47
Aaeg:AAEL012029-RB	supercont1.646	1	181843	Agam:ENSANGP00000026958	2R	1	39137643	Flyb:Rga-PB	3R	-1	1434720	430
Aaeg:AAEL012031-RA	supercont1.646	-1	225943	Agam:ENSANGP00000013679	2R	-1	39143269	Flyb:CG2919-PA	3R	-1	1430617	430
Aaeg:AAEL000442-RA	supercont1.8	1	902111	Agam:ENSANGP00000010477	2R	-1	39363296	Flyb:osk-PA	3R	1	4761977	477
Aaeg:AAEL000446-RA	supercont1.8	-1	668417	Agam:ENSANGP00000024667	2R	1	39407221	Flyb:pyd-PA	3R	-1	4662248	477
Aaeg:AAEL000457-RA	supercont1.8	-1	600031	Agam:ENSANGP00000022600	2R	1	39425321	Flyb:CG10233-PB	3R	-1	1062775	476
Aaeg:AAEL000440-RA	supercont1.8	1	568153	Agam:ENSANGP00000010461	2R	-1	39427848	Flyb:Mms19-PB	3R	1	1060058	476
Aaeg:AAEL010809-RA	supercont1.510	-1	163007	Agam:ENSANGP00000011355	2R	1	40403433	Flyb:Set-PA	3R	1	11090078	365
Aaeg:AAEL010823-RA	supercont1.510	1	128822	Agam:ENSANGP00000011882	2R	-1	40405344	Flyb:Oscp-PA	3R	1	11091845	365
Aaeg:AAEL005413-RB	supercont1.155	1	1467911	Agam:ENSANGP00000011326	2R	1	40925659	Flyb:mRpS11-PB	3R	1	12898745	89
Aaeg:AAEL005424-RA	supercont1.155	1	1373261	Agam:ENSANGP00000029619	2R	-1	40929261	Flyb:Keap1-PB	3R	-1	12901845	89
Aaeg:AAEL006589-RA	supercont1.212	-1	97070	Agam:ENSANGP00000020197	2R	-1	41366607	Flyb:Trc8-PC	3R	-1	25326259	150
Aaeg:AAEL006593-RA	supercont1.212	1	854543	Agam:ENSANGP00000020249	2R	1	41485949	Flyb:Dr-PA	3R	1	25386283	150
Aaeg:AAEL006595-RA	supercont1.212	1	1221177	Agam:ENSANGP00000027670	2R	1	41553633	Flyb:tin-PA	3R	1	17206257	151
Aaeg:AAEL006597-RA	supercont1.212	1	1284001	Agam:ENSANGP00000020261	2R	1	41564785	Flyb:bap-PA	3R	1	17215370	151
Aaeg:AAEL006597-RA	supercont1.212	1	1284001	Agam:ENSANGP00000020261	2R	1	41564785	Flyb:bap-PA	3R	1	17215370	151
Aaeg:AAEL006597-RA	supercont1.212	1	1284001	Agam:ENSANGP00000020261	2R	1	41564785	Flyb:bap-PA	X	1	19566750	151
Aaeg:AAEL006597-RA	supercont1.212	1	1284001	Agam:ENSANGP00000020261	2R	1	41564785	Flyb:bap-PA	X	1	19566750	151
Aaeg:AAEL005241-RA	supercont1.147	1	858817	Agam:ENSANGP00000020183	2R	1	41846508	Flyb:CG6051-PA	3R	-1	22953141	80
Aaeg:AAEL005240-RA	supercont1.147	1	906118	Agam:ENSANGP00000020169	2R	1	41851652	Flyb:CG5882-PA	3R	1	22945838	80
Aaeg:AAEL003755-RA	supercont1.96	-1	1730682	Agam:ENSANGP00000021299	2R	-1	42207337	Flyb:CG31126-PA	3R	1	20485688	527
Aaeg:AAEL003765-RA	supercont1.96	1	1917108	Agam:ENSANGP00000021317	2R	1	42251160	Flyb:slo-PO	3R	1	20513856	527
Aaeg:AAEL009169-RA	supercont1.375	-1	1128169	Agam:ENSANGP00000026176	2R	1	42459650	Flyb:CG6643-PA	3R	1	20379594	275
Aaeg:AAEL009171-RA	supercont1.375	-1	1034039	Agam:ENSANGP00000015170	2R	1	42497507	Flyb:CG13624-PD	3R	-1	20387398	275
Aaeg:AAEL010949-RA	supercont1.524	1	768761	Agam:ENSANGP00000015849	2R	1	42630283	Flyb:CG10903-PA	3R	1	3857177	375
Aaeg:AAEL010955-RA	supercont1.524	-1	788122	Agam:ENSANGP00000015856	2R	-1	42631316	Flyb:CG11035-PA	3R	-1	3858283	375
Aaeg:AAEL005224-RA	supercont1.146	1	1674172	Agam:ENSANGP00000019489	2R	1	43386460	Flyb:CG8116-PA	3R	1	4543304	79
Aaeg:AAEL005232-RA	supercont1.146	1	1638460	Agam:ENSANGP00000005592	2R	-1	43388871	Flyb:Cks85A-PA	3R	-1	4541340	79
Aaeg:AAEL003562-RA	supercont1.91	-1	428528	Agam:ENSANGP00000018876	2R	1	44342489	Flyb:Brd8-PA	3R	1	25050599	521
Aaeg:AAEL003561-RA	supercont1.91	-1	396231	Agam:ENSANGP00000018874	2R	1	44348670	Flyb:CG14507-PB	3R	-1	25052257	521
Aaeg:AAEL003575-RA	supercont1.91	1	138383	Agam:ENSANGP00000017813	2R	-1	44419452	Flyb:PQBP-1-PA	3R	-1	4212889	520
Aaeg:AAEL003577-RA	supercont1.91	1	81340	Agam:ENSANGP00000005623	2R	-1	44425081	Flyb:CG31369-PA	3R	-1	4246743	520
Aaeg:AAEL002123-RA	supercont1.49	-1	718012	Agam:ENSANGP00000005626	2R	-1	44574862	Flyb:CG7397-PA	3R	-1	13597914	346
Aaeg:AAEL002134-RA	supercont1.49	1	1053708	Agam:ENSANGP00000017929	2R	1	44643793	Flyb:CG7713-PA	3R	1	13621442	346
Aaeg:AAEL009102-RA	supercont1.369	-1	739033	Agam:ENSANGP00000017849	2R	-1	44871087	Flyb:crb-PA	3R	1	20130473	273
Aaeg:AAEL009099-RA	supercont1.369	-1	904520	Agam:ENSANGP00000024863	2R	-1	44910007	Flyb:CG6364-PA	3R	1	20116658	273
Aaeg:AAEL006082-RA	supercont1.188	1	1226270	Agam:ENSANGP00000003310	2R	1	45494111	Flyb:Taf1-PB	3R	1	2477113	122
Aaeg:AAEL006066-RA	supercont1.188	-1	1256692	Agam:ENSANGP00000017193	2R	-1	45498476	Flyb:CG1307-PB	3R	-1	2482652	122
Aaeg:AAEL006069-RA	supercont1.188	-1	1486953	Agam:ENSANGP00000017206	2R	-1	45546632	Flyb:CG33111-PA	3R	-1	19630757	123
Aaeg:AAEL006084-RA	supercont1.188	1	1786635	Agam:ENSANGP00000003319	2R	1	45590044	Flyb:CG12492-PA	3R	1	19673098	123
Aaeg:AAEL011154-RA	supercont1.544	-1	222761	Agam:ENSANGP00000017146	2R	-1	45730505	Flyb:CG3973-PA	X	1	6485910	382
Aaeg:AAEL011162-RA	supercont1.544	1	550182	Agam:ENSANGP00000017170	2R	-1	45767084	Flyb:APC7-PB	X	1	6443602	382
Aaeg:AAEL008129-RA	supercont1.302	-1	1244380	Agam:ENSANGP00000002757	2R	1	47181232	Flyb:dys-PA	3R	1	15355461	226
Aaeg:AAEL008129-RA	supercont1.302	-1	1244380	Agam:ENSANGP00000002757	2R	1	47181232	Flyb:dys-PA	3R	-1	21912721	226
Aaeg:AAEL008124-RA	supercont1.302	-1	850852	Agam:ENSANGP00000014283	2R	1	47201569	Flyb:CG14544-PA	3R	1	21886141	226
Aaeg:AAEL001046-RA	supercont1.21	-1	1898678	Agam:ENSANGP00000014350	2R	-1	47408246	Flyb:CG14714-PA	3R	1	7498610	144
Aaeg:AAEL001036-RA	supercont1.21	-1	2199181	Agam:ENSANGP00000014249	2R	-1	47464417	Flyb:CG10535-PA	3R	1	7478818	144
Aaeg:AAEL004368-RA	supercont1.116	-1	917782	Agam:ENSANGP00000026137	2R	1	47598888	Flyb:CG12785-PA	3R	-1	12096122	31
Aaeg:AAEL004351-RA	supercont1.116	-1	381769	Agam:ENSANGP00000023265	2R	1	47722909	Flyb:gish-PG	3R	1	12121319	31
Aaeg:AAEL013736-RA	supercont1.906	1	182206	Agam:ENSANGP00000014389	2R	1	47968955	Flyb:CG31368-PB	3R	1	7713306	519
Aaeg:AAEL013737-RA	supercont1.906	1	208422	Agam:ENSANGP00000014372	2R	1	47972890	Flyb:CG6971-PA	3R	-1	7718522	519
Aaeg:AAEL002769-RA	supercont1.67	1	1479272	Agam:ENSANGP00000010936	2R	-1	48861464	Flyb:pros-PC	3R	1	7208314	435
Aaeg:AAEL002764-RB	supercont1.67	1	186747	Agam:ENSANGP00000010144	2R	-1	49087254	Flyb:CG5214-PA	3R	1	7071237	435
Aaeg:AAEL002543-RA	supercont1.60	-1	2792098	Agam:ENSANGP00000026760	2R	1	49454562	Flyb:CG10999-PC	3R	1	1644166	411
Aaeg:AAEL002563-RA	supercont1.60	-1	2742143	Agam:ENSANGP00000004072	2R	-1	49465161	Flyb:Hpr1-PA	3R	-1	1645835	411
Aaeg:AAEL008417-RA	supercont1.323	-1	765551	Agam:ENSANGP00000020433	2R	1	50063958	Flyb:CG6013-PA	3R	1	14857643	240
Aaeg:AAEL008413-RA	supercont1.323	-1	1115381	Agam:ENSANGP00000020315	2R	-1	50099079	Flyb:cdi-PA	3R	-1	14892923	240
Aaeg:AAEL004275-RA	supercont1.113	-1	492372	Agam:ENSANGP00000020427	2R	1	50449151	Flyb:Osi8-PA	3R	1	2081554	28
Aaeg:AAEL004280-RA	supercont1.113	-1	278815	Agam:ENSANGP00000020356	2R	1	50569739	Flyb:Osi9-PA	3R	1	2086751	28
Aaeg:AAEL011308-RA	supercont1.565	-1	530632	Agam:ENSANGP00000029215	2R	-1	51231585	Flyb:ire-1-PA	3R	-1	15681840	390
Aaeg:AAEL011306-RA	supercont1.565	1	440287	Agam:ENSANGP00000023877	2R	-1	51264794	Flyb:CG4662-PB	3R	1	15676225	390
Aaeg:AAEL007203-RA	supercont1.243	1	1362101	Agam:ENSANGP00000023854	2R	1	52187135	Flyb:CG9667-PA	3R	-1	3951537	187
Aaeg:AAEL007209-RA	supercont1.243	1	1405472	Agam:ENSANGP00000012900	2R	1	52191027	Flyb:CG7891-PA	3R	1	3953385	187
Aaeg:AAEL004625-RA	supercont1.125	1	2166906	Agam:ENSANGP00000003485	2R	1	54158636	Flyb:CG2006-PA	3R	1	25315757	48
Aaeg:AAEL004603-RA	supercont1.125	-1	2167623	Agam:ENSANGP00000013502	2R	-1	54159432	Flyb:CG11500-PA	3R	-1	25316556	48
Aaeg:AAEL009911-RA	supercont1.437	-1	962720	Agam:ENSANGP00000014025	2R	1	54458146	Flyb:dod-PA	X	1	21156615	307
Aaeg:AAEL009912-RA	supercont1.437	1	945612	Agam:ENSANGP00000013373	2R	-1	54459773	Flyb:pen-PA	2L	1	10058580	307
Aaeg:AAEL009912-RA	supercont1.437	1	945612	Agam:ENSANGP00000013373	2R	-1	54459773	Flyb:pen-PA	2L	1	10058580	307
Aaeg:AAEL009912-RA	supercont1.437	1	945612	Agam:ENSANGP00000013373	2R	-1	54459773	Flyb:pen-PA	X	-1	21158835	307
Aaeg:AAEL009912-RA	supercont1.437	1	945612	Agam:ENSANGP00000013373	2R	-1	54459773	Flyb:pen-PA	X	-1	21158835	307
Aaeg:AAEL000070-RA	supercont1.1	-1	100435	Agam:ENSANGP00000013505	2R	1	54483429	Flyb:CG31342-PA	3R	1	8814363	1
Aaeg:AAEL000029-RA	supercont1.1	1	91362	Agam:ENSANGP00000013424	2R	-1	54490240	Flyb:yellow-f2-PA	3R	-1	8820004	1
Aaeg:AAEL003750-RA	supercont1.96	-1	1603884	Agam:ENSANGP00000031373	2R	1	55595518	Flyb:Nlp-PA	3R	1	25833227	526
Aaeg:AAEL003746-RA	supercont1.96	-1	1578200	Agam:ENSANGP00000013071	2R	-1	55600690	Flyb:CG7920-PA	3R	-1	25838552	526
Aaeg:AAEL002810-RA	supercont1.68	-1	1961312	Agam:ENSANGP00000013133	2R	-1	55814980	Flyb:Mcm5-PA	3R	1	6615573	442
Aaeg:AAEL002817-RA	supercont1.68	-1	1891051	Agam:ENSANGP00000013043	2R	-1	55826415	Flyb:CG14687-PA	3R	1	6618961	442
Aaeg:AAEL000091-RA	supercont1.1	-1	2723720	Agam:ENSANGP00000023276	2R	1	56706180	Flyb:Aos1-PA	3R	-1	8258886	3
Aaeg:AAEL000097-RA	supercont1.1	1	2731148	Agam:ENSANGP00000003869	2R	-1	56707669	Flyb:Sas-PA	3R	1	2999536	3
Aaeg:AAEL000097-RA	supercont1.1	1	2731148	Agam:ENSANGP00000003869	2R	-1	56707669	Flyb:Sas-PA	3R	1	2999536	3
Aaeg:AAEL000097-RA	supercont1.1	1	2731148	Agam:ENSANGP00000003869	2R	-1	56707669	Flyb:Sas-PA	3R	1	8252944	3
Aaeg:AAEL000097-RA	supercont1.1	1	2731148	Agam:ENSANGP00000003869	2R	-1	56707669	Flyb:Sas-PA	3R	1	8252944	3
Aaeg:AAEL008786-RA	supercont1.349	1	226673	Agam:ENSANGP00000016968	2R	1	56730687	Flyb:CG9000-PA	2R	-1	12515973	261
Aaeg:AAEL008803-RB	supercont1.349	1	295797	Agam:ENSANGP00000017037	2R	-1	56732780	Flyb:CG6665-PC	2R	1	12472987	261
Aaeg:AAEL004564-RA	supercont1.123	-1	1044656	Agam:ENSANGP00000011737	2R	-1	57074920	Flyb:CG8420-PA	3R	1	5075204	43
Aaeg:AAEL004557-RA	supercont1.123	-1	1123376	Agam:ENSANGP00000011733	2R	1	57079432	Flyb:CG16733-PA	3R	1	5078138	43
Aaeg:AAEL013726-RA	supercont1.903	1	134700	Agam:ENSANGP00000012197	2R	1	57141395	Flyb:epsin-like-PB	3R	1	18240802	518
Aaeg:AAEL013724-RA	supercont1.903	1	153712	Agam:ENSANGP00000031361	2R	1	57145673	Flyb:CG31285-PA	3R	1	18241664	518
Aaeg:AAEL011258-RA	supercont1.560	1	599578	Agam:ENSANGP00000027115	2R	-1	57175151	Flyb:CG31048-PA	3R	1	24686883	388
Aaeg:AAEL011248-RA	supercont1.560	-1	417541	Agam:ENSANGP00000011692	2R	1	57205633	Flyb:inx3-PA	3R	-1	24681606	388
Aaeg:AAEL011326-RA	supercont1.567	1	560275	Agam:ENSANGP00000011734	2R	1	57347710	Flyb:CG5745-PA	3R	1	16929367	392
Aaeg:AAEL011329-RB	supercont1.567	-1	576294	Agam:ENSANGP00000003976	2R	-1	57351454	Flyb:CG7044-PA	3R	-1	16925674	392
Aaeg:AAEL004879-RA	supercont1.133	-1	1098013	Agam:ENSANGP00000031913	2R	1	57537497	Flyb:CG33977-PA	3R	-1	9228535	61
Aaeg:AAEL004890-RA	supercont1.133	-1	984339	Agam:ENSANGP00000014550	2R	1	57562303	Flyb:CG14375-PA	3R	-1	9216530	61
Aaeg:AAEL010413-RA	supercont1.476	-1	335038	Agam:ENSANGP00000001455	2R	-1	58175091	Flyb:CG6800-PA	3R	1	17602396	337
Aaeg:AAEL010408-RA	supercont1.476	1	459446	Agam:ENSANGP00000026917	2R	1	58234169	Flyb:GABA-B-R2-PB	3R	-1	17598654	337
Aaeg:AAEL002800-RA	supercont1.68	-1	1572497	Agam:ENSANGP00000020949	2R	1	58511435	Flyb:DNApol-epsilon-PA	3R	1	19177360	441
Aaeg:AAEL002813-RA	supercont1.68	1	1552323	Agam:ENSANGP00000021586	2R	-1	58515247	Flyb:ATPsyn-Cf6-PA	3R	-1	19181316	441
Aaeg:AAEL003845-RA	supercont1.98	1	73022	Agam:ENSANGP00000025810	2R	1	58596408	Flyb:pnt-PD	3R	-1	19128327	528
Aaeg:AAEL003834-RA	supercont1.98	-1	115122	Agam:ENSANGP00000020970	2R	1	58620394	Flyb:CG6763-PA	3R	1	19111059	528
Aaeg:AAEL003757-RA	supercont1.96	1	59149	Agam:ENSANGP00000021599	2R	1	58624759	Flyb:CG4434-PA	3R	-1	19114929	525
Aaeg:AAEL003744-RA	supercont1.96	-1	129634	Agam:ENSANGP00000020883	2R	-1	58627305	Flyb:cdc16-PA	3R	1	19108243	525
Aaeg:AAEL005056-RA	supercont1.140	1	1410081	Agam:ENSANGP00000016103	2R	-1	59553704	Flyb:CG7834-PA	3R	-1	25628118	70
Aaeg:AAEL005054-RA	supercont1.140	-1	1401703	Agam:ENSANGP00000016061	2R	1	59555828	Flyb:CG7789-PA	3R	1	25629514	70
Aaeg:AAEL009949-RA	supercont1.440	1	755072	Agam:ENSANGP00000018764	2R	-1	59753725	Flyb:Scr-PC	3R	-1	2659504	311
Aaeg:AAEL009947-RA	supercont1.440	1	568055	Agam:ENSANGP00000018777	2R	-1	59836800	Flyb:Antp-PK	3R	-1	2729822	311
Aaeg:AAEL003295-RA	supercont1.83	1	2612956	Agam:ENSANGP00000016033	3L	1	2394593	Flyb:CG14590-PA	2R	-1	1587097	493
Aaeg:AAEL003287-RB	supercont1.83	-1	2635829	Agam:ENSANGP00000027662	3L	-1	2399541	Flyb:CG7843-PC	2R	-1	1590669	493
Aaeg:AAEL003533-RA	supercont1.89	1	1752048	Agam:ENSANGP00000000148	3L	-1	2458791	Flyb:ttv-PA	2R	1	10070570	511
Aaeg:AAEL003545-RA	supercont1.89	-1	1057886	Agam:ENSANGP00000010097	3L	-1	2484452	Flyb:CG12869-PA	2R	1	10108771	511
Aaeg:AAEL011736-RA	supercont1.607	1	87407	Agam:ENSANGP00000010268	3L	-1	2778274	Flyb:CG6984-PA	2R	1	12607331	413
Aaeg:AAEL011741-RA	supercont1.607	-1	113289	Agam:ENSANGP00000023017	3L	-1	2781761	Flyb:GstS1-PC	2R	-1	12609412	413
Aaeg:AAEL011233-RA	supercont1.556	1	178372	Agam:ENSANGP00000022836	3L	-1	3623945	Flyb:CG18591-PA	2L	-1	7885202	386
Aaeg:AAEL011227-RA	supercont1.556	1	185052	Agam:ENSANGP00000013655	3L	-1	3624969	Flyb:CG7102-PA	2L	-1	7885296	386
Aaeg:AAEL002579-RA	supercont1.61	-1	667354	Agam:ENSANGP00000013653	3L	1	3958211	Flyb:CG10713-PA	3L	-1	13404132	414
Aaeg:AAEL002623-RA	supercont1.61	-1	610740	Agam:ENSANGP00000028283	3L	1	3973029	Flyb:CG10140-PA	3L	-1	13413844	414
Aaeg:AAEL004823-RB	supercont1.131	1	1609017	Agam:ENSANGP00000020588	3L	-1	5582391	Flyb:Sod2-PA	2R	-1	12288269	59
Aaeg:AAEL004812-RA	supercont1.131	-1	1444640	Agam:ENSANGP00000024542	3L	1	5620106	Flyb:unc-104-PD	2R	-1	12273233	59
Aaeg:AAEL005569-RA	supercont1.163	-1	936275	Agam:ENSANGP00000031820	3L	1	7673937	Flyb:CG30004-PA	2R	-1	5228891	100
Aaeg:AAEL005593-RA	supercont1.163	-1	1471881	Agam:ENSANGP00000016832	3L	-1	7900650	Flyb:CG1648-PA	2R	-1	5327482	100
Aaeg:AAEL006391-RA	supercont1.203	-1	1612015	Agam:ENSANGP00000000513	3L	-1	8024478	Flyb:CG13462-PA	3L	-1	15014070	137
Aaeg:AAEL006395-RA	supercont1.203	-1	1737307	Agam:ENSANGP00000000514	3L	-1	8068574	Flyb:cp309-PB	3L	-1	15040910	137
Aaeg:AAEL000258-RA	supercont1.5	-1	1072247	Agam:ENSANGP00000016730	3L	-1	8347668	Flyb:CG3362-PA	2R	1	19703950	354
Aaeg:AAEL000295-RA	supercont1.5	1	1012971	Agam:ENSANGP00000029120	3L	-1	8367673	Flyb:CG3363-PA	2R	1	19699344	354
Aaeg:AAEL003975-RA	supercont1.102	1	2651534	Agam:ENSANGP00000016784	3L	1	8627473	Flyb:CG12325-PA	2R	1	6341445	7
Aaeg:AAEL003958-RA	supercont1.102	1	2603408	Agam:ENSANGP00000000555	3L	-1	8646969	Flyb:CG12344-PA	2R	-1	6347171	7
Aaeg:AAEL003968-RA	supercont1.102	-1	2118494	Agam:ENSANGP00000016886	3L	1	8725246	Flyb:Iswi-PC	2R	1	8154545	6
Aaeg:AAEL003970-RA	supercont1.102	1	2063178	Agam:ENSANGP00000016729	3L	-1	8734768	Flyb:CG8785-PA	2R	-1	8158413	6
Aaeg:AAEL008728-RA	supercont1.345	1	915001	Agam:ENSANGP00000018486	3L	1	8751865	Flyb:CG9143-PA	2R	-1	15792348	259
Aaeg:AAEL008724-RA	supercont1.345	-1	937351	Agam:ENSANGP00000000566	3L	-1	8754100	Flyb:CG11788-PA	2R	1	15790249	259
Aaeg:AAEL013237-RA	supercont1.809	1	177465	Agam:ENSANGP00000000580	3L	1	8981552	Flyb:CG5924-PA	2L	-1	9892386	483
Aaeg:AAEL013232-RA	supercont1.809	-1	183502	Agam:ENSANGP00000018599	3L	-1	8982581	Flyb:CG4537-PA	2L	1	9891056	483
Aaeg:AAEL003853-RA	supercont1.98	-1	2263355	Agam:ENSANGP00000000600	3L	1	9370080	Flyb:sns-PA	2R	1	4337645	531
Aaeg:AAEL003837-RA	supercont1.98	-1	2074790	Agam:ENSANGP00000019607	3L	1	9804062	Flyb:Rya-r44F-PD	2R	1	4387197	531
Aaeg:AAEL004655-RA	supercont1.126	1	1154413	Agam:ENSANGP00000029401	3L	1	10683750	Flyb:CG15654-PA	2R	1	16600790	50
Aaeg:AAEL004664-RA	supercont1.126	1	1174942	Agam:ENSANGP00000021246	3L	1	10694280	Flyb:CG15655-PA	2R	1	16607232	50
Aaeg:AAEL004110-RA	supercont1.107	1	2077007	Agam:ENSANGP00000003083	3L	-1	15795883	Flyb:Pitslre-PA	3L	1	20708093	16
Aaeg:AAEL004113-RA	supercont1.107	1	2065700	Agam:ENSANGP00000027810	3L	1	15799322	Flyb:CG4042-PA	3L	-1	20704472	16
Aaeg:AAEL005712-RA	supercont1.171	-1	1657549	Agam:ENSANGP00000021996	3L	1	18125706	Flyb:msps-PA	3R	1	11881702	107
Aaeg:AAEL005720-RA	supercont1.171	1	1584673	Agam:ENSANGP00000022016	3L	-1	18136959	Flyb:CG10185-PA	3R	-1	11889823	107
Aaeg:AAEL004044-RA	supercont1.106	1	2067373	Agam:ENSANGP00000008324	3L	1	18246496	Flyb:hiw-PA	X	-1	14870900	11
Aaeg:AAEL004074-RA	supercont1.106	-1	2113482	Agam:ENSANGP00000021994	3L	-1	18260999	Flyb:CG32594-PB	X	1	14862628	11
Aaeg:AAEL010256-RA	supercont1.465	1	766803	Agam:ENSANGP00000008278	3L	-1	19942733	Flyb:lack-PA	2R	1	13113379	330
Aaeg:AAEL010249-RA	supercont1.465	-1	683591	Agam:ENSANGP00000015645	3L	1	19979473	Flyb:CG30105-PA	2R	-1	13107016	330
Aaeg:AAEL003831-RA	supercont1.98	-1	1797705	Agam:ENSANGP00000027567	3L	1	20541901	Flyb:CG30502-PA	2R	-1	2959890	530
Aaeg:AAEL003817-RA	supercont1.98	1	1779516	Agam:ENSANGP00000008251	3L	-1	20544516	Flyb:kappaB-Ras-PA	2R	-1	2957175	530
Aaeg:AAEL003819-RA	supercont1.98	1	1336775	Agam:ENSANGP00000008238	3L	-1	20652606	Flyb:Atg1-PA	3L	-1	12768839	529
Aaeg:AAEL003859-RA	supercont1.98	-1	1238646	Agam:ENSANGP00000015015	3L	1	20676271	Flyb:CG17667-PA	3L	1	12767542	529
Aaeg:AAEL013221-RA	supercont1.808	-1	243855	Agam:ENSANGP00000015019	3L	-1	20689184	Flyb:RpL10Ab-PA	3L	1	11797463	482
Aaeg:AAEL013225-RA	supercont1.808	1	383095	Agam:ENSANGP00000015028	3L	1	20700864	Flyb:CG5946-PB	3L	-1	11793449	482
Aaeg:AAEL005477-RA	supercont1.158	1	1465125	Agam:ENSANGP00000018469	3L	1	20938475	Flyb:CG8839-PD	2R	-1	7856690	93
Aaeg:AAEL005475-RA	supercont1.158	-1	1494187	Agam:ENSANGP00000018564	3L	-1	20943259	Flyb:CG8493-PA	2R	1	7854835	93
Aaeg:AAEL005146-RA	supercont1.143	1	141605	Agam:ENSANGP00000018509	3L	1	21519464	Flyb:CG7172-PA	3L	-1	21502326	73
Aaeg:AAEL005141-RA	supercont1.143	-1	143001	Agam:ENSANGP00000018418	3L	-1	21520513	Flyb:CG32441-PB	3L	1	21508784	73
Aaeg:AAEL007042-RB	supercont1.233	-1	1430859	Agam:ENSANGP00000014939	3L	-1	24765361	Flyb:Psi-PA	2R	-1	12380746	178
Aaeg:AAEL007043-RA	supercont1.233	-1	1479035	Agam:ENSANGP00000014192	3L	-1	24776550	Flyb:Dek-PC	2R	1	12372944	178
Aaeg:AAEL005870-RA	supercont1.177	1	117154	Agam:ENSANGP00000014920	3L	1	24780800	Flyb:Fen1-PA	2R	-1	12369593	111
Aaeg:AAEL005848-RA	supercont1.177	-1	128697	Agam:ENSANGP00000014393	3L	-1	24783758	Flyb:CG5859-PA	2R	1	12367090	111
Aaeg:AAEL011639-RA	supercont1.596	-1	761816	Agam:ENSANGP00000014915	3L	1	24944506	Flyb:CG30197-PA	2R	1	10029354	404
Aaeg:AAEL011642-RA	supercont1.596	1	761156	Agam:ENSANGP00000031789	3L	-1	24947196	Flyb:CG10112-PA	2R	-1	10028774	404
Aaeg:AAEL001527-RA	supercont1.35	1	3302917	Agam:ENSANGP00000019799	3L	-1	27316325	Flyb:mbl-PA	2R	1	12828989	263
Aaeg:AAEL001509-RB	supercont1.35	-1	1810217	Agam:ENSANGP00000019802	3L	1	27749858	Flyb:CG30456-PA	2R	1	12619998	263
Aaeg:AAEL006934-RA	supercont1.228	-1	1446793	Agam:ENSANGP00000019249	3L	1	30321874	Flyb:MED19-PA	3L	-1	17810483	172
Aaeg:AAEL006928-RA	supercont1.228	-1	1336930	Agam:ENSANGP00000019195	3L	-1	30345270	Flyb:CG7430-PA	3L	1	17813428	172
Aaeg:AAEL014177-RA	supercont1.1027	1	27958	Agam:ENSANGP00000014175	3L	1	32618522	Flyb:Arf72A-PA	3L	1	15948988	8
Aaeg:AAEL014178-RA	supercont1.1027	1	1595	Agam:ENSANGP00000014184	3L	-1	32621465	Flyb:DNApol-delta-PA	3L	-1	15951312	8
Aaeg:AAEL003445-RA	supercont1.86	-1	496574	Agam:ENSANGP00000008858	3L	1	32999007	Flyb:CG9646-PA	2R	1	12566279	499
Aaeg:AAEL003413-RA	supercont1.86	1	483154	Agam:ENSANGP00000008856	3L	1	33007428	Flyb:fat-spondin-PB	2R	1	12573044	499
Aaeg:AAEL002614-RA	supercont1.61	1	877753	Agam:ENSANGP00000019995	3L	-1	33308436	Flyb:Ent3-PA	3L	1	12829207	415
Aaeg:AAEL002597-RA	supercont1.61	-1	864543	Agam:ENSANGP00000020181	3L	1	33315568	Flyb:CG11009-PA	3L	1	12825496	415
Aaeg:AAEL011892-RA	supercont1.627	1	703066	Agam:ENSANGP00000020040	3L	1	33704661	Flyb:CG13192-PA	2R	1	7342012	421
Aaeg:AAEL011893-RA	supercont1.627	-1	716920	Agam:ENSANGP00000020036	3L	-1	33706802	Flyb:CG8991-PA	2R	-1	7349265	421
Aaeg:AAEL012327-RA	supercont1.678	-1	337598	Agam:ENSANGP00000020123	3L	-1	33822403	Flyb:CG13018-PA	2R	-1	9673163	440
Aaeg:AAEL012329-RA	supercont1.678	1	340316	Agam:ENSANGP00000030339	3L	1	33823738	Flyb:CG8257-PA	2R	-1	9676202	440
Aaeg:AAEL000788-RA	supercont1.16	-1	1769581	Agam:ENSANGP00000021240	3L	1	34554839	Flyb:Mmp2-PA	2R	-1	5159326	95
Aaeg:AAEL000758-RB	supercont1.16	1	1656017	Agam:ENSANGP00000025877	3L	-1	34569594	Flyb:Uba1-PA	2R	-1	5202718	95
Aaeg:AAEL006693-RB	supercont1.217	-1	443396	Agam:ENSANGP00000021292	3L	1	34673818	Flyb:Updo-PA	2R	1	5097226	155
Aaeg:AAEL006698-RA	supercont1.217	1	415668	Agam:ENSANGP00000021277	3L	-1	34675402	Flyb:RpL31-PB	2R	1	5099516	155
Aaeg:AAEL011925-RA	supercont1.631	1	87445	Agam:ENSANGP00000008729	3L	1	35235175	Flyb:mRpS31-PA	3L	1	15971177	426
Aaeg:AAEL011927-RA	supercont1.631	-1	56238	Agam:ENSANGP00000008728	3L	-1	35241722	Flyb:mib1-PA	3L	-1	15974451	426
Aaeg:AAEL003419-RA	supercont1.86	-1	2514402	Agam:ENSANGP00000015354	3L	1	35363467	Flyb:CG32209-PB	3L	-1	19669673	503
Aaeg:AAEL003425-RB	supercont1.86	-1	2326941	Agam:ENSANGP00000022426	3L	1	35394230	Flyb:LCBP1-PA	3L	-1	19658025	503
Aaeg:AAEL006360-RA	supercont1.201	-1	1423064	Agam:ENSANGP00000015225	3L	-1	35689091	Flyb:CG7385-PA	3L	-1	20043953	135
Aaeg:AAEL006350-RA	supercont1.201	-1	1463931	Agam:ENSANGP00000015291	3L	1	35695614	Flyb:CG14185-PA	3L	1	20040598	135
Aaeg:AAEL002919-RA	supercont1.71	1	2646352	Agam:ENSANGP00000015307	3L	1	35898874	Flyb:CG10257-PA	2R	1	10458504	449
Aaeg:AAEL002885-RA	supercont1.71	-1	2699918	Agam:ENSANGP00000008680	3L	-1	35907734	Flyb:aPKC-PA	2R	-1	10469009	449
Aaeg:AAEL003964-RA	supercont1.102	-1	1959673	Agam:ENSANGP00000015819	3L	1	36855027	Flyb:CG8632-PB	2R	1	8170252	5
Aaeg:AAEL003960-RA	supercont1.102	-1	1897015	Agam:ENSANGP00000029647	3L	-1	36857185	Flyb:CG8646-PA	2R	1	8174207	5
Aaeg:AAEL009533-RA	supercont1.404	1	1077954	Agam:ENSANGP00000017014	3L	-1	37923047	Flyb:CG11658-PA	3L	-1	11678002	297
Aaeg:AAEL009534-RA	supercont1.404	-1	1012526	Agam:ENSANGP00000009174	3L	1	37935731	Flyb:CG7319-PC	3L	1	11683322	297
Aaeg:AAEL008394-RA	supercont1.321	-1	1045467	Agam:ENSANGP00000014082	3L	1	38047338	Flyb:CG6878-PA	3L	1	15127441	238
Aaeg:AAEL008391-RA	supercont1.321	1	1040532	Agam:ENSANGP00000014005	3L	-1	38047501	Flyb:CG7011-PA	3L	-1	15127490	238
Aaeg:AAEL003488-RA	supercont1.87	-1	895743	Agam:ENSANGP00000014019	3L	-1	38713211	Flyb:S1P-PA	3L	-1	21549408	505
Aaeg:AAEL003460-RA	supercont1.87	-1	937656	Agam:ENSANGP00000009118	3L	-1	38719152	Flyb:CG11307-PA	3L	1	21552777	505
Aaeg:AAEL007889-RA	supercont1.287	1	304837	Agam:ENSANGP00000019994	3L	1	40031998	Flyb:CG17739-PA	2R	1	7824669	214
Aaeg:AAEL007885-RA	supercont1.287	1	70611	Agam:ENSANGP00000020034	3L	-1	40071367	Flyb:CG13163-PA	2R	1	7837628	214
Aaeg:AAEL004114-RA	supercont1.107	-1	1314599	Agam:ENSANGP00000020030	3L	1	40811221	Flyb:CG2121-PA	2R	-1	3912229	15
Aaeg:AAEL004094-RA	supercont1.107	1	1290826	Agam:ENSANGP00000020007	3L	-1	40815618	Flyb:CG11641-PA	2R	1	3903536	15
Aaeg:AAEL007066-RA	supercont1.233	1	1313182	Agam:ENSANGP00000011676	3L	1	41232160	Flyb:Rae1-PA	2R	-1	17166971	177
Aaeg:AAEL007054-RA	supercont1.233	-1	1317920	Agam:ENSANGP00000011766	3L	-1	41233147	Flyb:CG10320-PA	2R	1	17166129	177
Aaeg:AAEL000640-RB	supercont1.13	1	552101	Agam:ENSANGP00000027287	3L	1	41751347	Flyb:CG11241-PA	3L	-1	22670293	55
Aaeg:AAEL000649-RA	supercont1.13	-1	602031	Agam:ENSANGP00000026745	3L	-1	41757433	Flyb:CG11367-PA	3L	1	22664564	55
Aaeg:AAEL009202-RA	supercont1.378	1	976630	Agam:ENSANGP00000011763	3L	1	41830613	Flyb:CG33051-PA	3L	-1	17391949	277
Aaeg:AAEL009200-RA	supercont1.378	-1	984813	Agam:ENSANGP00000027128	3L	-1	41832558	Flyb:CG3885-PA	3L	-1	17388864	277
Aaeg:AAEL001643-RA	supercont1.38	-1	2398417	Agam:ENSANGP00000022251	3R	1	61471	Flyb:CG31790-PA	2L	-1	18664396	280
Aaeg:AAEL001659-RA	supercont1.38	-1	1826481	Agam:ENSANGP00000002513	3R	1	139232	Flyb:MESR3-PA	2L	1	18651265	280
Aaeg:AAEL003539-RA	supercont1.89	1	2608960	Agam:ENSANGP00000022244	3R	-1	170956	Flyb:ebi-PA	2L	1	416510	513
Aaeg:AAEL003510-RA	supercont1.89	1	2566552	Agam:ENSANGP00000022231	3R	-1	174807	Flyb:CG13690-PA	2L	-1	419080	513
Aaeg:AAEL009266-RA	supercont1.385	-1	161493	Agam:ENSANGP00000002431	3R	-1	468519	Flyb:CG10186-PC	2L	-1	19509452	283
Aaeg:AAEL009269-RA	supercont1.385	-1	258969	Agam:ENSANGP00000002417	3R	-1	483426	Flyb:CG10132-PA	2L	1	19518840	283
Aaeg:AAEL001865-RB	supercont1.44	-1	1443053	Agam:ENSANGP00000010376	3R	-1	758027	Flyb:Pdsw-PB	2L	1	3466793	309
Aaeg:AAEL001864-RA	supercont1.44	-1	1475383	Agam:ENSANGP00000010386	3R	-1	765720	Flyb:Thor-PA	2L	1	3479003	309
Aaeg:AAEL001652-RA	supercont1.38	-1	1270619	Agam:ENSANGP00000029815	3R	-1	1464718	Flyb:amos-PA	2L	-1	18592538	279
Aaeg:AAEL001657-RA	supercont1.38	-1	1379170	Agam:ENSANGP00000018513	3R	1	1474797	Flyb:CG10333-PA	2L	1	18604117	279
Aaeg:AAEL001204-RA	supercont1.25	-1	1800459	Agam:ENSANGP00000002281	3R	1	1849525	Flyb:mdy-PA	2L	1	16819347	193
Aaeg:AAEL001200-RA	supercont1.25	1	1768521	Agam:ENSANGP00000018448	3R	-1	1852048	Flyb:CG31739-PA	2L	1	16825478	193
Aaeg:AAEL001504-RA	supercont1.34	1	1029474	Agam:ENSANGP00000018464	3R	-1	1981410	Flyb:smi35A-PD	2L	-1	14191910	252
Aaeg:AAEL001477-RA	supercont1.34	1	526363	Agam:ENSANGP00000028560	3R	-1	2038274	Flyb:wb-PB	2L	1	14295734	252
Aaeg:AAEL012893-RA	supercont1.756	1	247975	Agam:ENSANGP00000018389	3R	-1	2153071	Flyb:CG31746-PA	2L	-1	18173178	463
Aaeg:AAEL012892-RA	supercont1.756	1	170015	Agam:ENSANGP00000028540	3R	1	2306141	Flyb:CG31786-PA	2L	-1	18206230	463
Aaeg:AAEL000699-RA	supercont1.14	-1	710314	Agam:ENSANGP00000030237	3R	1	2418763	Flyb:Nufip-PA	3L	-1	18712742	66
Aaeg:AAEL000720-RA	supercont1.14	1	709852	Agam:ENSANGP00000010012	3R	-1	2420090	Flyb:MED11-PA	3L	1	18711453	66
Aaeg:AAEL000719-RA	supercont1.14	-1	667715	Agam:ENSANGP00000007278	3R	1	2430331	Flyb:rtGEF-PB	2L	1	20347541	65
Aaeg:AAEL000683-RA	supercont1.14	-1	438362	Agam:ENSANGP00000010000	3R	1	2456942	Flyb:CG16798-PA	2L	-1	20367252	65
Aaeg:AAEL000714-RA	supercont1.14	-1	333795	Agam:ENSANGP00000027123	3R	1	2608273	Flyb:Eaat2-PA	2L	-1	739512	64
Aaeg:AAEL000700-RA	supercont1.14	1	308309	Agam:ENSANGP00000009993	3R	-1	2615223	Flyb:ds-PA	2L	-1	674364	64
Aaeg:AAEL000701-RA	supercont1.14	-1	1321139	Agam:ENSANGP00000007187	3R	-1	3212999	Flyb:mRpL4-PA	2L	-1	16324536	67
Aaeg:AAEL000709-RA	supercont1.14	-1	1275765	Agam:ENSANGP00000010014	3R	1	3215855	Flyb:cact-PC	2L	-1	16315660	67
Aaeg:AAEL008836-RA	supercont1.352	-1	275102	Agam:ENSANGP00000027234	3R	-1	3326282	Flyb:CG4841-PA	2L	1	16909548	264
Aaeg:AAEL008845-RA	supercont1.352	-1	378317	Agam:ENSANGP00000007153	3R	-1	3342234	Flyb:CG15133-PA	2L	1	16889465	264
Aaeg:AAEL004292-RA	supercont1.113	1	1512954	Agam:ENSANGP00000012363	3R	1	3649070	Flyb:CG8736-PA	2R	-1	4106405	29
Aaeg:AAEL004300-RA	supercont1.113	1	1663481	Agam:ENSANGP00000007110	3R	-1	3663783	Flyb:CG8735-PA	2R	-1	4110576	29
Aaeg:AAEL013536-RA	supercont1.864	-1	279707	Agam:ENSANGP00000012302	3R	-1	3990745	Flyb:RpS27A-PA	2L	1	10410059	504
Aaeg:AAEL013533-RA	supercont1.864	-1	277468	Agam:ENSANGP00000023534	3R	-1	3992217	Flyb:Ip259-PA	2L	1	10409155	504
Aaeg:AAEL000311-RA	supercont1.6	-1	3107826	Agam:ENSANGP00000012392	3R	-1	4175460	Flyb:CG15825-PB	2L	-1	19380803	408
Aaeg:AAEL000370-RA	supercont1.6	-1	3229331	Agam:ENSANGP00000011863	3R	-1	4191717	Flyb:CG17544-PA	2L	-1	19388080	408
Aaeg:AAEL002019-RA	supercont1.47	-1	2907282	Agam:ENSANGP00000011709	3R	1	4762689	Flyb:CG15173-PA	2L	-1	19040192	334
Aaeg:AAEL001968-RB	supercont1.47	1	2891564	Agam:ENSANGP00000011614	3R	-1	4767451	Flyb:Catsup-PA	2L	1	19038575	334
Aaeg:AAEL001959-RA	supercont1.47	1	2845634	Agam:ENSANGP00000031565	3R	-1	4777721	Flyb:fok-PA	2L	-1	20079689	333
Aaeg:AAEL001986-RA	supercont1.47	-1	2841788	Agam:ENSANGP00000011562	3R	1	4778940	Flyb:neb-PA	2L	1	20078642	333
Aaeg:AAEL001970-RA	supercont1.47	-1	1257814	Agam:ENSANGP00000031564	3R	1	5010965	Flyb:CG15924-PA	2R	1	11824783	331
Aaeg:AAEL002039-RA	supercont1.47	-1	892978	Agam:ENSANGP00000011558	3R	1	5076455	Flyb:CG3896-PA	2R	1	11829093	331
Aaeg:AAEL005970-RA	supercont1.182	-1	1934075	Agam:ENSANGP00000010420	3R	-1	5654516	Flyb:CG8370-PA	2R	1	11519200	116
Aaeg:AAEL005968-RA	supercont1.182	1	1915612	Agam:ENSANGP00000010523	3R	1	5663611	Flyb:CG8386-PA	2R	-1	11522125	116
Aaeg:AAEL006286-RA	supercont1.199	-1	1157926	Agam:ENSANGP00000006893	3R	1	5828215	Flyb:CG7810-PA	2L	-1	8310577	131
Aaeg:AAEL006299-RA	supercont1.199	1	1090584	Agam:ENSANGP00000010457	3R	-1	5829956	Flyb:CG7818-PA	2L	1	8309203	131
Aaeg:AAEL003345-RA	supercont1.84	1	1665117	Agam:ENSANGP00000006856	3R	1	6124673	Flyb:CG9510-PA	2L	-1	8940859	496
Aaeg:AAEL003348-RA	supercont1.84	-1	1681459	Agam:ENSANGP00000010455	3R	-1	6141363	Flyb:CG9487-PA	2L	1	8927203	496
Aaeg:AAEL003347-RA	supercont1.84	-1	124014	Agam:ENSANGP00000010506	3R	-1	6288053	Flyb:CG10237-PA	2L	-1	19432920	495
Aaeg:AAEL003346-RA	supercont1.84	-1	257014	Agam:ENSANGP00000006790	3R	-1	6297091	Flyb:Hs2st-PA	2L	-1	19439892	495
Aaeg:AAEL010682-RA	supercont1.496	-1	818675	Agam:ENSANGP00000021901	3R	1	7144672	Flyb:CG5155-PA	2L	1	7389750	352
Aaeg:AAEL010688-RA	supercont1.496	1	728839	Agam:ENSANGP00000022014	3R	-1	7152055	Flyb:CG5160-PA	2L	-1	7391730	352
Aaeg:AAEL006450-RA	supercont1.205	-1	429509	Agam:ENSANGP00000021957	3R	1	7166101	Flyb:CG3652-PA	2L	-1	4393334	139
Aaeg:AAEL006446-RA	supercont1.205	1	408655	Agam:ENSANGP00000021902	3R	-1	7170136	Flyb:Tps1-PA	2L	1	4390704	139
Aaeg:AAEL001710-RA	supercont1.40	1	2413268	Agam:ENSANGP00000011409	3R	1	7708739	Flyb:CG13942-PA	2R	1	9842683	296
Aaeg:AAEL001725-RA	supercont1.40	-1	3217741	Agam:ENSANGP00000006758	3R	-1	7903748	Flyb:CG8613-PA	2R	1	9868686	296
Aaeg:AAEL001499-RA	supercont1.34	1	2145565	Agam:ENSANGP00000018228	3R	1	8850345	Flyb:CG14021-PB	2L	-1	5331642	254
Aaeg:AAEL001490-RA	supercont1.34	1	2217552	Agam:ENSANGP00000018310	3R	1	8858968	Flyb:CG14022-PA	2L	-1	5328355	254
Aaeg:AAEL013270-RA	supercont1.816	1	19487	Agam:ENSANGP00000018222	3R	1	9395857	Flyb:Hr38-PC	2L	-1	20675390	485
Aaeg:AAEL013271-RA	supercont1.816	-1	51898	Agam:ENSANGP00000006685	3R	-1	9404536	Flyb:CG9317-PB	2L	-1	20716390	485
Aaeg:AAEL001170-RA	supercont1.24	-1	658591	Agam:ENSANGP00000019613	3R	-1	9410584	Flyb:CG5068-PA	3L	1	8961735	181
Aaeg:AAEL001156-RA	supercont1.24	-1	625775	Agam:ENSANGP00000019601	3R	1	9413946	Flyb:CG5280-PA	3L	-1	8963618	181
Aaeg:AAEL004774-RA	supercont1.129	-1	878787	Agam:ENSANGP00000019687	3R	1	9417480	Flyb:zf30C-PA	2L	1	9760444	54
Aaeg:AAEL004753-RA	supercont1.129	-1	570327	Agam:ENSANGP00000006679	3R	1	9489358	Flyb:Nckx30C-PB	2L	-1	9730405	54
Aaeg:AAEL012267-RA	supercont1.673	1	359295	Agam:ENSANGP00000006629	3R	-1	10371416	Flyb:Mcr-PA	2L	-1	8077784	439
Aaeg:AAEL012262-RB	supercont1.673	1	220593	Agam:ENSANGP00000019222	3R	-1	10419833	Flyb:Bsg-PF	2L	1	8098772	439
Aaeg:AAEL002186-RA	supercont1.51	1	1762828	Agam:ENSANGP00000006594	3R	1	10987688	Flyb:CG2614-PA	2L	1	20645385	361
Aaeg:AAEL002235-RA	supercont1.51	-1	1811449	Agam:ENSANGP00000019178	3R	-1	10993307	Flyb:CG31678-PA	2L	-1	20655245	361
Aaeg:AAEL002219-RA	supercont1.51	-1	2999374	Agam:ENSANGP00000019146	3R	-1	11321810	Flyb:Dnz1-PA	2L	-1	10855734	364
Aaeg:AAEL002240-RA	supercont1.51	1	3039024	Agam:ENSANGP00000019165	3R	1	11327731	Flyb:Stam-PA	2L	1	10860176	364
Aaeg:AAEL013366-RA	supercont1.828	-1	421384	Agam:ENSANGP00000010947	3R	-1	11469957	Flyb:CG2657-PA	2L	-1	22905	492
Aaeg:AAEL013367-RA	supercont1.828	1	357544	Agam:ENSANGP00000010938	3R	-1	11480010	Flyb:CG31973-PB	2L	-1	33332	492
Aaeg:AAEL012523-RA	supercont1.705	1	253660	Agam:ENSANGP00000011127	3R	1	11768540	Flyb:Tfb4-PA	2L	-1	1150082	448
Aaeg:AAEL012520-RA	supercont1.705	-1	255178	Agam:ENSANGP00000027871	3R	-1	11770007	Flyb:CG4749-PA	2L	1	1148619	448
Aaeg:AAEL006669-RA	supercont1.216	-1	301795	Agam:ENSANGP00000013048	3R	1	13734757	Flyb:smo-PA	2L	1	279668	154
Aaeg:AAEL006676-RA	supercont1.216	1	266195	Agam:ENSANGP00000013196	3R	-1	13739985	Flyb:CG3625-PA	2L	-1	285193	154
Aaeg:AAEL004727-RB	supercont1.128	1	1745381	Agam:ENSANGP00000011514	3R	1	15523515	Flyb:Ipk1-PA	2R	1	16382578	52
Aaeg:AAEL004719-RA	supercont1.128	1	2113246	Agam:ENSANGP00000011049	3R	1	15606480	Flyb:insc-PA	2R	-1	16331462	52
Aaeg:AAEL002080-RA	supercont1.48	-1	361901	Agam:ENSANGP00000011519	3R	-1	15991730	Flyb:sip2-PB	2L	-1	6962705	339
Aaeg:AAEL002065-RA	supercont1.48	1	374650	Agam:ENSANGP00000011126	3R	1	15993445	Flyb:CG10399-PA	2L	1	6960956	339
Aaeg:AAEL001645-RA	supercont1.38	-1	351633	Agam:ENSANGP00000015767	3R	1	16166137	Flyb:bwa-PA	2L	1	20065644	278
Aaeg:AAEL001642-RA	supercont1.38	1	330702	Agam:ENSANGP00000015792	3R	-1	16167970	Flyb:pr-PC	2L	-1	20070401	278
Aaeg:AAEL002636-RA	supercont1.62	-1	2234446	Agam:ENSANGP00000005169	3R	-1	16860934	Flyb:Bem46-PA	2L	1	2988876	418
Aaeg:AAEL002647-RA	supercont1.62	1	2280828	Agam:ENSANGP00000026244	3R	-1	16870120	Flyb:okr-PA	2L	-1	2991389	418
Aaeg:AAEL002673-RA	supercont1.63	-1	2147819	Agam:ENSANGP00000012401	3R	1	17752105	Flyb:CG5278-PA	3R	-1	18385382	425
Aaeg:AAEL002662-RA	supercont1.63	1	2056026	Agam:ENSANGP00000012448	3R	-1	17755061	Flyb:CG6921-PC	3R	1	18381132	425
Aaeg:AAEL002678-RA	supercont1.63	1	1256213	Agam:ENSANGP00000012358	3R	-1	17863502	Flyb:Rsu-1-PA	2L	-1	13640478	424
Aaeg:AAEL002663-RA	supercont1.63	1	1201876	Agam:ENSANGP00000012370	3R	-1	17877191	Flyb:kuz-PC	2L	1	13594460	424
Aaeg:AAEL013172-RA	supercont1.801	1	252213	Agam:ENSANGP00000016645	3R	1	19090466	Flyb:CG1832-PB	2L	-1	22155138	480
Aaeg:AAEL013177-RA	supercont1.801	1	220172	Agam:ENSANGP00000016790	3R	-1	19098417	Flyb:CG3262-PA	2L	1	22227989	480
Aaeg:AAEL003512-RA	supercont1.89	-1	2145052	Agam:ENSANGP00000016718	3R	-1	19317528	Flyb:Drip-PA	2R	-1	6936635	512
Aaeg:AAEL003550-RA	supercont1.89	1	2495708	Agam:ENSANGP00000016769	3R	1	19377220	Flyb:CG7777-PB	2R	1	6956591	512
Aaeg:AAEL005330-RA	supercont1.151	-1	136570	Agam:ENSANGP00000006391	3R	-1	19398704	Flyb:Gyc32E-PA	2L	-1	11143839	84
Aaeg:AAEL005336-RA	supercont1.151	-1	200913	Agam:ENSANGP00000016770	3R	-1	19414737	Flyb:CG6287-PA	2L	-1	11153637	84
Aaeg:AAEL009059-RA	supercont1.366	-1	149629	Agam:ENSANGP00000013934	3R	1	20501412	Flyb:p16-ARC-PA	2L	1	2580626	270
Aaeg:AAEL009068-RA	supercont1.366	1	130269	Agam:ENSANGP00000023088	3R	-1	20506634	Flyb:Drp1-PA	2L	-1	2583528	270
Aaeg:AAEL001203-RA	supercont1.25	1	3619736	Agam:ENSANGP00000021360	3R	-1	21100252	Flyb:Patsas-PA	2L	-1	12102155	194
Aaeg:AAEL001206-RA	supercont1.25	-1	3608728	Agam:ENSANGP00000021424	3R	1	21104813	Flyb:Aats-thr-PC	2L	1	12105630	194
Aaeg:AAEL006413-RA	supercont1.204	1	1505878	Agam:ENSANGP00000021387	3R	1	21316362	Flyb:morgue-PA	2L	-1	4443840	138
Aaeg:AAEL006409-RA	supercont1.204	1	1477684	Agam:ENSANGP00000021389	3R	-1	21319254	Flyb:CG15438-PA	2L	-1	4447709	138
Aaeg:AAEL000238-RA	supercont1.4	1	611127	Agam:ENSANGP00000025294	3R	-1	22908814	Flyb:CG8172-PA	2R	-1	4522190	292
Aaeg:AAEL000224-RA	supercont1.4	1	431688	Agam:ENSANGP00000017184	3R	-1	22928823	Flyb:CG13744-PA	2R	-1	4527407	292
Aaeg:AAEL001239-RA	supercont1.27	-1	1490037	Agam:ENSANGP00000006521	3R	1	23204123	Flyb:CG3994-PA	2L	-1	15234192	204
Aaeg:AAEL001240-RA	supercont1.27	-1	720116	Agam:ENSANGP00000017229	3R	1	23346011	Flyb:CG4168-PA	2L	-1	15166881	204
Aaeg:AAEL001809-RA	supercont1.43	1	428329	Agam:ENSANGP00000017194	3R	1	23610776	Flyb:CG13139-PA	2L	1	10365632	303
Aaeg:AAEL001797-RA	supercont1.43	-1	522672	Agam:ENSANGP00000017225	3R	-1	23736255	Flyb:CG5045-PA	2L	1	10357348	303
Aaeg:AAEL001503-RA	supercont1.34	1	2743772	Agam:ENSANGP00000028764	3R	1	24441880	Flyb:Nhe2-PB	2L	1	21111195	256
Aaeg:AAEL001473-RA	supercont1.34	-1	2932519	Agam:ENSANGP00000005190	3R	-1	24472440	Flyb:Dap160-PB	2L	-1	21127227	256
Aaeg:AAEL006966-RD	supercont1.230	-1	481205	Agam:ENSANGP00000025831	3R	-1	25632126	Flyb:CG17292-PA	2L	1	8373361	175
Aaeg:AAEL006977-RA	supercont1.230	-1	531784	Agam:ENSANGP00000016496	3R	-1	25648649	Flyb:Pp2A-29B-PC	2L	1	8368014	175
Aaeg:AAEL010123-RA	supercont1.454	1	268028	Agam:ENSANGP00000010645	3R	1	26052672	Flyb:Ent1-PA	2L	-1	356803	325
Aaeg:AAEL010124-RA	supercont1.454	-1	297748	Agam:ENSANGP00000005249	3R	-1	26069860	Flyb:Plc21C-PF	2L	1	331736	325
Aaeg:AAEL001171-RA	supercont1.24	1	694461	Agam:ENSANGP00000016833	3R	1	28116277	Flyb:CG10463-PA	2L	1	19755840	182
Aaeg:AAEL001158-RA	supercont1.24	-1	716936	Agam:ENSANGP00000016841	3R	-1	28118155	Flyb:fbp-PA	2L	-1	19758163	182
Aaeg:AAEL001194-RA	supercont1.24	-1	883047	Agam:ENSANGP00000016695	3R	1	28145992	Flyb:CG3523-PA	2L	1	3063703	183
Aaeg:AAEL001183-RA	supercont1.24	-1	995740	Agam:ENSANGP00000016691	3R	-1	28155333	Flyb:CG17221-PB	2L	1	3040976	183
Aaeg:AAEL007944-RA	supercont1.291	1	1385483	Agam:ENSANGP00000016703	3R	1	28655232	Flyb:CG3887-PA	2L	1	5011524	216
Aaeg:AAEL007945-RA	supercont1.291	-1	1361780	Agam:ENSANGP00000016885	3R	1	28673896	Flyb:eIF-3p40-PB	2L	-1	5052025	216
Aaeg:AAEL013700-RA	supercont1.898	1	232321	Agam:ENSANGP00000016837	3R	1	28746980	Flyb:Rpb11-PA	2L	-1	17405961	515
Aaeg:AAEL013697-RA	supercont1.898	-1	255496	Agam:ENSANGP00000023159	3R	-1	28759336	Flyb:CLIP-190-PC	2L	1	17397850	515
Aaeg:AAEL005646-RA	supercont1.168	1	1048575	Agam:ENSANGP00000012255	3R	-1	30021838	Flyb:CG16947-PA	2L	-1	6461687	103
Aaeg:AAEL005653-RA	supercont1.168	1	1030142	Agam:ENSANGP00000012287	3R	-1	30026337	Flyb:CG9526-PA	2L	1	6457526	103
Aaeg:AAEL006433-RA	supercont1.205	1	582978	Agam:ENSANGP00000012252	3R	-1	30533472	Flyb:CG8486-PA	2L	1	8181098	140
Aaeg:AAEL006436-RA	supercont1.205	1	469316	Agam:ENSANGP00000012293	3R	-1	30572014	Flyb:CG8475-PA	2L	-1	8193978	140
Aaeg:AAEL007221-RA	supercont1.244	-1	301071	Agam:ENSANGP00000010640	3R	1	30922745	Flyb:bsh-PA	2L	-1	19763362	188
Aaeg:AAEL007240-RA	supercont1.244	1	219835	Agam:ENSANGP00000010655	3R	-1	30946170	Flyb:CdGAPr-PA	2L	-1	19775797	188
Aaeg:AAEL009331-RA	supercont1.390	1	258205	Agam:ENSANGP00000003484	3R	1	31264374	Flyb:CG10563-PA	2L	1	19124044	287
Aaeg:AAEL009345-RA	supercont1.390	-1	295275	Agam:ENSANGP00000022464	3R	1	31267557	Flyb:l(2)37Cc-PB	2L	-1	19118916	287
Aaeg:AAEL011900-RA	supercont1.628	-1	396328	Agam:ENSANGP00000003580	3R	1	32303931	Flyb:CG9171-PA	2L	-1	5770260	423
Aaeg:AAEL011897-RA	supercont1.628	1	320062	Agam:ENSANGP00000018877	3R	-1	32316376	Flyb:CG11142-PA	2L	-1	5764808	423
Aaeg:AAEL011903-RA	supercont1.628	-1	293298	Agam:ENSANGP00000003584	3R	1	32319655	Flyb:fu2-PA	2L	1	8465475	422
Aaeg:AAEL011898-RA	supercont1.628	-1	144576	Agam:ENSANGP00000027495	3R	1	32377738	Flyb:fu12-PB	2L	-1	8450530	422
Aaeg:AAEL004491-RA	supercont1.121	1	185787	Agam:ENSANGP00000018131	3R	1	32893364	Flyb:CG33316-PB	2L	1	19914833	36
Aaeg:AAEL004494-RA	supercont1.121	1	457746	Agam:ENSANGP00000004010	3R	1	32997818	Flyb:CG10662-PA	2L	1	19951851	36
Aaeg:AAEL004504-RB	supercont1.121	-1	1802809	Agam:ENSANGP00000018664	3R	1	33482788	Flyb:CG7632-PA	3L	1	21239286	37
Aaeg:AAEL004493-RA	supercont1.121	-1	1821587	Agam:ENSANGP00000018078	3R	-1	33490311	Flyb:CG7338-PA	3L	1	21270471	37
Aaeg:AAEL004492-RA	supercont1.121	1	1889760	Agam:ENSANGP00000018659	3R	1	33502634	Flyb:Cks30A-PA	2L	1	9331201	38
Aaeg:AAEL004496-RA	supercont1.121	1	1978894	Agam:ENSANGP00000027697	3R	1	33519330	Flyb:Eaat1-PA	2L	1	9339457	38
Aaeg:AAEL004485-RA	supercont1.121	-1	2028508	Agam:ENSANGP00000004030	3R	-1	33540575	Flyb:Nhe1-PA	2L	-1	105559	39
Aaeg:AAEL004501-RA	supercont1.121	1	2054744	Agam:ENSANGP00000018620	3R	1	33547235	Flyb:M(2)21AB-PD	2L	1	111112	39
Aaeg:AAEL004506-RA	supercont1.121	1	2312009	Agam:ENSANGP00000026652	3R	1	33597486	Flyb:CG17211-PA	2L	1	12127362	40
Aaeg:AAEL004502-RA	supercont1.121	-1	2342332	Agam:ENSANGP00000018616	3R	-1	33604565	Flyb:rho-6-PA	2L	-1	12131002	40
Aaeg:AAEL000718-RA	supercont1.14	-1	4269376	Agam:ENSANGP00000030734	3R	1	34033070	Flyb:vir-1-PC	2L	-1	12414443	68
Aaeg:AAEL000695-RA	supercont1.14	-1	2922428	Agam:ENSANGP00000005501	3R	1	34359777	Flyb:aret-PC	2L	1	12291106	68
Aaeg:AAEL010766-RA	supercont1.507	-1	339759	Agam:ENSANGP00000020932	3R	-1	36696697	Flyb:IP3K1-PA	2L	1	9785476	357
Aaeg:AAEL010779-RA	supercont1.507	1	455691	Agam:ENSANGP00000020850	3R	1	36719537	Flyb:ppk16-PA	2L	-1	9772100	357
Aaeg:AAEL009067-RA	supercont1.366	-1	1004020	Agam:ENSANGP00000020973	3R	-1	36941727	Flyb:l(2)35Df-PA	2L	1	15749894	271
Aaeg:AAEL009066-RA	supercont1.366	1	1040221	Agam:ENSANGP00000021056	3R	1	36954219	Flyb:l(2)35Di-PB	2L	-1	15746663	271
Aaeg:AAEL014557-RA	supercont1.1165	-1	122030	Agam:ENSANGP00000022230	3R	1	37559314	Flyb:cad-PB	2L	1	20764285	32
Aaeg:AAEL014555-RA	supercont1.1165	1	49124	Agam:ENSANGP00000010287	3R	-1	37602842	Flyb:Pomp-PA	2L	1	20775752	32
Aaeg:AAEL000622-RA	supercont1.12	-1	95983	Agam:ENSANGP00000023761	3R	-1	37672555	Flyb:CG6621-PA	3R	-1	6717272	34
Aaeg:AAEL000629-RA	supercont1.12	-1	157721	Agam:ENSANGP00000010251	3R	-1	37679616	Flyb:Adk3-PB	3R	-1	6713708	34
Aaeg:AAEL002375-RA	supercont1.55	-1	2528052	Agam:ENSANGP00000010227	3R	-1	37901718	Flyb:CG9586-PB	2L	-1	9165993	385
Aaeg:AAEL002402-RA	supercont1.55	1	3064013	Agam:ENSANGP00000026993	3R	1	38026461	Flyb:CG32982-PB	2L	1	9157287	385
Aaeg:AAEL001211-RA	supercont1.25	-1	1733605	Agam:ENSANGP00000013183	3R	-1	39153304	Flyb:CG17293-PA	2L	1	8375002	192
Aaeg:AAEL001199-RA	supercont1.25	-1	1716291	Agam:ENSANGP00000013178	3R	-1	39165788	Flyb:CG13390-PA	2L	-1	8376169	192
Aaeg:AAEL010738-RA	supercont1.504	-1	369525	Agam:ENSANGP00000010108	3R	1	42041506	Flyb:Ndae1-PB	2L	-1	7233564	356
Aaeg:AAEL010742-RA	supercont1.504	1	322875	Agam:ENSANGP00000010217	3R	-1	42053532	Flyb:CG4567-PA	2L	-1	7221758	356
Aaeg:AAEL010689-RA	supercont1.496	-1	657860	Agam:ENSANGP00000014400	3R	1	42479093	Flyb:CG8230-PA	2R	-1	4457903	351
Aaeg:AAEL010680-RA	supercont1.496	1	643154	Agam:ENSANGP00000026031	3R	-1	42482651	Flyb:CG13748-PA	2R	1	4452451	351
Aaeg:AAEL013214-RA	supercont1.806	-1	140885	Agam:ENSANGP00000015733	3R	-1	43567141	Flyb:CG4839-PA	2L	1	10151149	481
Aaeg:AAEL013215-RA	supercont1.806	-1	327750	Agam:ENSANGP00000026020	3R	-1	43606190	Flyb:Sur-PA	2L	-1	10190714	481
Aaeg:AAEL000959-RA	supercont1.19	1	204089	Agam:ENSANGP00000028252	3R	1	43799370	Flyb:CG30274-PA	2R	1	18333607	124
Aaeg:AAEL000954-RA	supercont1.19	1	225323	Agam:ENSANGP00000015689	3R	1	43799402	Flyb:CG30264-PA	2R	1	18335644	124
Aaeg:AAEL001154-RA	supercont1.24	-1	563548	Agam:ENSANGP00000015697	3R	1	44092394	Flyb:CG8209-PA	3L	1	7951042	180
Aaeg:AAEL001159-RA	supercont1.24	1	550856	Agam:ENSANGP00000015692	3R	-1	44093831	Flyb:RNaseX25-PA	3L	1	7945202	180
Aaeg:AAEL013353-RB	supercont1.827	-1	286135	Agam:ENSANGP00000029546	3R	-1	44536057	Flyb:chic-PA	2L	-1	5976551	491
Aaeg:AAEL013359-RA	supercont1.827	-1	335160	Agam:ENSANGP00000023201	3R	-1	44559861	Flyb:eIF-4a-PA	2L	1	5983500	491
Aaeg:AAEL003666-RA	supercont1.94	-1	1872873	Agam:ENSANGP00000013312	3R	-1	45188061	Flyb:CG10602-PD	2L	-1	18852226	523
Aaeg:AAEL003704-RA	supercont1.94	-1	1934592	Agam:ENSANGP00000013345	3R	1	45190178	Flyb:mRpL13-PA	2L	-1	18854547	523
Aaeg:AAEL001484-RB	supercont1.34	1	2280934	Agam:ENSANGP00000013197	3R	-1	45419745	Flyb:emb-PA	2L	1	8406104	255
Aaeg:AAEL001475-RA	supercont1.34	-1	2240050	Agam:ENSANGP00000030701	3R	-1	45435113	Flyb:CG13398-PA	2L	-1	8414216	255
Aaeg:AAEL009147-RA	supercont1.372	1	732886	Agam:ENSANGP00000013353	3R	1	45437276	Flyb:CG11926-PA	2L	1	4851601	274
Aaeg:AAEL009139-RA	supercont1.372	1	621732	Agam:ENSANGP00000013397	3R	-1	45475888	Flyb:CG31660-PC	2L	1	4870192	274
Aaeg:AAEL012840-RA	supercont1.748	1	247817	Agam:ENSANGP00000013307	3R	-1	45729692	Flyb:stai-PB	2L	1	6116603	457
Aaeg:AAEL012841-RA	supercont1.748	1	95227	Agam:ENSANGP00000013203	3R	-1	45763858	Flyb:CG9175-PB	2L	-1	6097933	457
Aaeg:AAEL000578-RA	supercont1.11	-1	1983471	Agam:ENSANGP00000022334	3R	-1	46579744	Flyb:CG11201-PA	2L	1	6734363	24
Aaeg:AAEL000580-RA	supercont1.11	-1	2007584	Agam:ENSANGP00000022337	3R	-1	46586869	Flyb:CG11323-PA	2L	-1	6738314	24
Aaeg:AAEL004975-RA	supercont1.137	-1	807165	Agam:ENSANGP00000011885	3R	-1	47339945	Flyb:CG15269-PA	2L	1	15107177	62
Aaeg:AAEL004982-RA	supercont1.137	-1	992402	Agam:ENSANGP00000011812	3R	-1	47386667	Flyb:CG15270-PA	2L	1	15081614	62
Aaeg:AAEL002386-RA	supercont1.55	-1	1617015	Agam:ENSANGP00000006039	3R	1	47546907	Flyb:CG7289-PA	2L	1	1983351	384
Aaeg:AAEL002369-RA	supercont1.55	1	1660878	Agam:ENSANGP00000029777	3R	1	47550576	Flyb:CG15356-PA	2L	-1	1978578	384
Aaeg:AAEL006654-RA	supercont1.215	-1	1624346	Agam:ENSANGP00000011889	3R	1	47763370	Flyb:CG10343-PA	2L	1	18699872	153
Aaeg:AAEL006646-RA	supercont1.215	1	1599186	Agam:ENSANGP00000011811	3R	-1	47766247	Flyb:CG10338-PA	2L	1	18692941	153
Aaeg:AAEL007684-RA	supercont1.274	-1	1017151	Agam:ENSANGP00000011837	3R	-1	48058252	Flyb:Tektin-A-PA	2L	1	15851247	208
Aaeg:AAEL007680-RA	supercont1.274	1	1052755	Agam:ENSANGP00000030693	3R	-1	48060436	Flyb:CG13243-PA	2L	1	15849259	208
Aaeg:AAEL007681-RA	supercont1.274	1	716431	Agam:ENSANGP00000012416	3R	-1	48118358	Flyb:CG9140-PA	2L	-1	6061813	207
Aaeg:AAEL007694-RA	supercont1.274	-1	633015	Agam:ENSANGP00000006068	3R	1	48138026	Flyb:CG9144-PA	2L	-1	6064728	207
Aaeg:AAEL007691-RA	supercont1.274	1	603918	Agam:ENSANGP00000011827	3R	-1	48141912	Flyb:Oatp33Ea-PA	2L	-1	12443090	206
Aaeg:AAEL007682-RA	supercont1.274	1	509640	Agam:ENSANGP00000019204	3R	-1	48174296	Flyb:bun-PA	2L	-1	12498706	206
Aaeg:AAEL004761-RA	supercont1.129	-1	341952	Agam:ENSANGP00000012552	3R	1	49203704	Flyb:CG31711-PA	2L	1	9927879	53
Aaeg:AAEL004766-RA	supercont1.129	-1	392395	Agam:ENSANGP00000031500	3R	-1	49262744	Flyb:CG13125-PA	2L	-1	9923828	53
Aaeg:AAEL001491-RA	supercont1.34	1	1629763	Agam:ENSANGP00000012631	3R	1	49793017	Flyb:CG3769-PA	2L	1	9436117	253
Aaeg:AAEL001476-RA	supercont1.34	-1	1444932	Agam:ENSANGP00000006150	3R	1	49818412	Flyb:numb-PA	2L	1	9461281	253
Aaeg:AAEL013070-RA	supercont1.786	-1	250480	Agam:ENSANGP00000012650	3R	-1	49883191	Flyb:CG15385-PA	2L	-1	2211313	471
Aaeg:AAEL013072-RA	supercont1.786	1	262772	Agam:ENSANGP00000012473	3R	1	49892995	Flyb:CG7082-PC	2L	1	2224283	471
Aaeg:AAEL013068-RA	supercont1.786	-1	319803	Agam:ENSANGP00000012572	3R	-1	49901574	Flyb:mts-PA	2L	1	7829927	472
Aaeg:AAEL013069-RA	supercont1.786	1	367543	Agam:ENSANGP00000012560	3R	1	49909165	Flyb:Rack1-PA	2L	-1	7826436	472
Aaeg:AAEL001482-RA	supercont1.34	-1	3510501	Agam:ENSANGP00000006187	3R	1	50717807	Flyb:CG18397-PA	2L	-1	18926152	257
Aaeg:AAEL001500-RA	supercont1.34	-1	3022481	Agam:ENSANGP00000006189	3R	1	50828835	Flyb:tup-PB	2L	-1	18866806	257
Aaeg:AAEL001838-RA	supercont1.44	-1	564920	Agam:ENSANGP00000012306	3R	1	50839563	Flyb:CG13993-PA	2L	1	6069492	308
Aaeg:AAEL001871-RA	supercont1.44	1	561651	Agam:ENSANGP00000012200	3R	-1	50840302	Flyb:CG9154-PA	2L	-1	6070200	308
Aaeg:AAEL011396-RA	supercont1.575	1	172958	Agam:ENSANGP00000002886	3R	1	51837112	Flyb:Dl-PB	2L	-1	17435947	395
Aaeg:AAEL011396-RA	supercont1.575	1	172958	Agam:ENSANGP00000002886	3R	1	51837112	Flyb:Dl-PB	3R	-1	15140906	395
Aaeg:AAEL011392-RA	supercont1.575	1	270064	Agam:ENSANGP00000031497	3R	1	51854255	Flyb:CG5237-PA	3R	-1	15064049	395
Aaeg:AAEL007367-RA	supercont1.251	1	1342254	Agam:ENSANGP00000031496	3R	1	51946706	Flyb:CG14898-PA	3R	-1	12307842	196
Aaeg:AAEL007370-RA	supercont1.251	-1	1347420	Agam:ENSANGP00000002909	3R	-1	51947056	Flyb:Dhfr-PA	3R	1	12307280	196
Aaeg:AAEL007374-RA	supercont1.251	1	934131	Agam:ENSANGP00000014433	3R	-1	51983273	Flyb:yellow-c-PA	2L	1	15032573	195
Aaeg:AAEL007372-RA	supercont1.251	1	790775	Agam:ENSANGP00000002916	3R	-1	52008167	Flyb:GABA-B-R1-PA	2L	1	15022570	195
Aaeg:AAEL008265-RA	supercont1.310	1	1219875	Agam:ENSANGP00000025813	3R	1	52104262	Flyb:CG30336-PA	2R	1	5039875	231
Aaeg:AAEL008273-RA	supercont1.310	1	1240822	Agam:ENSANGP00000014221	3R	1	52110213	Flyb:CG30337-PA	2R	1	5046747	231
Aaeg:AAEL008263-RA	supercont1.310	1	1276393	Agam:ENSANGP00000020219	3R	1	52172864	Flyb:CG12190-PA	2R	1	18179105	232
Aaeg:AAEL008262-RA	supercont1.310	-1	1419285	Agam:ENSANGP00000020215	3R	-1	52212672	Flyb:ppa-PA	2R	-1	18195496	232
Aaeg:AAEL002346-RB	supercont1.54	-1	500405	Agam:ENSANGP00000017355	X	1	993690	Flyb:plexA-PD	4	-1	1039166	377
Aaeg:AAEL002357-RA	supercont1.54	-1	134362	Agam:ENSANGP00000004715	X	1	1025179	Flyb:unc-13-PB	4	-1	902396	377
Aaeg:AAEL008314-RA	supercont1.313	1	710750	Agam:ENSANGP00000027524	X	1	2467570	Flyb:CG4655-PA	3R	1	6665411	233
Aaeg:AAEL008318-RA	supercont1.313	1	744411	Agam:ENSANGP00000019269	X	1	2473194	Flyb:CG4509-PB	3R	1	6671355	233
Aaeg:AAEL008016-RA	supercont1.295	1	1251128	Agam:ENSANGP00000012437	X	-1	5011428	Flyb:CG2254-PA	X	-1	7925279	219
Aaeg:AAEL008014-RA	supercont1.295	1	1088412	Agam:ENSANGP00000012371	X	-1	5029910	Flyb:CG2256-PB	X	-1	7930037	219
Aaeg:AAEL009493-RA	supercont1.399	1	955396	Agam:ENSANGP00000014887	X	1	5325069	Flyb:CG13011-PA	X	1	16513624	291
Aaeg:AAEL009490-RA	supercont1.399	1	813541	Agam:ENSANGP00000014822	X	-1	5349166	Flyb:r-PB	X	1	16492479	291
Aaeg:AAEL003041-RA	supercont1.75	-1	222654	Agam:ENSANGP00000015578	X	1	5964637	Flyb:CG15884-PA	3R	-1	22916174	458
Aaeg:AAEL003027-RA	supercont1.75	-1	129254	Agam:ENSANGP00000031885	X	1	5995435	Flyb:CG6131-PA	3R	-1	22910534	458
Aaeg:AAEL005444-RA	supercont1.156	-1	458906	Agam:ENSANGP00000029123	X	-1	6137820	Flyb:capa-PA	3R	-1	25739422	91
Aaeg:AAEL005437-RA	supercont1.156	-1	515557	Agam:ENSANGP00000014854	X	-1	6149426	Flyb:trp-PA	3R	-1	25743053	91
Aaeg:AAEL010928-RA	supercont1.523	1	322253	Agam:ENSANGP00000021947	X	1	6785842	Flyb:Smg1-PA	X	1	6676203	374
Aaeg:AAEL010929-RA	supercont1.523	-1	354797	Agam:ENSANGP00000010052	X	-1	6792150	Flyb:CG12796-PA	X	-1	6677306	374
Aaeg:AAEL012599-RA	supercont1.715	1	436893	Agam:ENSANGP00000007490	X	-1	7066739	Flyb:CG1531-PB	X	1	7795097	450
Aaeg:AAEL012603-RA	supercont1.715	1	302078	Agam:ENSANGP00000007489	X	-1	7089737	Flyb:CG1530-PA	X	1	7784519	450
Aaeg:AAEL002450-RA	supercont1.57	1	211984	Agam:ENSANGP00000021988	X	-1	7186646	Flyb:TH1-PA	X	-1	16224263	393
Aaeg:AAEL002436-RB	supercont1.57	-1	252746	Agam:ENSANGP00000024702	X	1	7195196	Flyb:CG4239-PB	X	1	16221421	393
Aaeg:AAEL005515-RD	supercont1.161	-1	384105	Agam:ENSANGP00000010117	X	-1	7257765	Flyb:sqd-PB	3R	-1	9466910	98
Aaeg:AAEL005528-RA	supercont1.161	1	422227	Agam:ENSANGP00000007476	X	-1	7290089	Flyb:rin-PC	3R	1	9476038	98
Aaeg:AAEL013844-RA	supercont1.939	1	44131	Agam:ENSANGP00000031876	X	1	9828968	Flyb:CG8498-PA	2L	-1	8162124	522
Aaeg:AAEL013842-RA	supercont1.939	-1	70545	Agam:ENSANGP00000017307	X	-1	9832642	Flyb:CG8506-PA	2L	1	8160910	522
Aaeg:AAEL005432-RA	supercont1.156	-1	211277	Agam:ENSANGP00000017306	X	1	9850106	Flyb:CG31004-PA	3R	-1	27013410	90
Aaeg:AAEL005429-RA	supercont1.156	-1	180537	Agam:ENSANGP00000017325	X	1	9860185	Flyb:CG1544-PA	3R	1	27026049	90
Aaeg:AAEL013651-RA	supercont1.890	1	194723	Agam:ENSANGP00000031287	X	1	10477570	Flyb:CG32611-PB	X	-1	13711386	514
Aaeg:AAEL013650-RA	supercont1.890	1	212134	Agam:ENSANGP00000019151	X	1	10500188	Flyb:CG11071-PA	X	-1	13689550	514
Aaeg:AAEL001466-RA	supercont1.33	-1	329235	Agam:ENSANGP00000019159	X	-1	11322060	Flyb:CG33968-PA	X	1	14965349	243
Aaeg:AAEL001442-RA	supercont1.33	-1	462806	Agam:ENSANGP00000001501	X	-1	11344135	Flyb:rab3-GEF-PA	X	1	14936583	243
Aaeg:AAEL006828-RA	supercont1.222	1	819255	Agam:ENSANGP00000011862	X	1	12568729	Flyb:CG17758-PA	X	-1	5499861	164
Aaeg:AAEL006822-RA	supercont1.222	1	1017782	Agam:ENSANGP00000011865	X	1	12603782	Flyb:CG11473-PA	X	-1	5477877	164
Aaeg:AAEL002084-RA	supercont1.48	-1	1312245	Agam:ENSANGP00000025481	X	-1	13457861	Flyb:CG14220-PA	X	-1	19435021	340
Aaeg:AAEL002047-RA	supercont1.48	1	1339879	Agam:ENSANGP00000017569	X	-1	13489748	Flyb:RpS10b-PB	X	1	19432610	340
Aaeg:AAEL002503-RA	supercont1.59	1	2297025	Agam:ENSANGP00000017573	X	1	14238993	Flyb:Yippee-PB	X	-1	13220671	400
Aaeg:AAEL002523-RA	supercont1.59	-1	2301379	Agam:ENSANGP00000017570	X	-1	14239798	Flyb:Tim9a-PA	X	1	13219500	400
Aaeg:AAEL003020-RA	supercont1.75	1	638636	Agam:ENSANGP00000001878	X	1	15253231	Flyb:tll-PA	3R	1	26679007	459
Aaeg:AAEL003049-RA	supercont1.75	-1	706574	Agam:ENSANGP00000023009	X	-1	15282468	Flyb:CG12045-PA	3R	1	26693898	459
Aaeg:AAEL010941-RA	supercont1.523	1	35113	Agam:ENSANGP00000010214	X	1	15844503	Flyb:tty-PA	X	-1	21145113	373
Aaeg:AAEL010939-RA	supercont1.523	-1	88316	Agam:ENSANGP00000001905	X	-1	15864492	Flyb:CG1486-PB	X	1	21136606	373
Aaeg:AAEL005529-RA	supercont1.161	-1	865372	Agam:ENSANGP00000017739	X	-1	16808032	Flyb:tnc-PA	3R	1	20842281	99
Aaeg:AAEL005526-RA	supercont1.161	-1	1575129	Agam:ENSANGP00000017832	X	-1	16916926	Flyb:Smg6-PA	3R	-1	20857289	99
Aaeg:AAEL005436-RA	supercont1.156	1	1710574	Agam:ENSANGP00000005327	X	1	17661822	Flyb:CG7265-PA	3R	-1	10718861	92
Aaeg:AAEL005435-RB	supercont1.156	1	1728202	Agam:ENSANGP00000024967	X	1	17670555	Flyb:CG3731-PA	3R	1	10717047	92
Aaeg:AAEL006362-RA	supercont1.202	-1	1502321	Agam:ENSANGP00000018542	X	-1	18374216	Flyb:aralar1-PA	3R	-1	26273953	136
Aaeg:AAEL006370-RA	supercont1.202	1	1583524	Agam:ENSANGP00000018550	X	-1	18389609	Flyb:CG2224-PA	3R	-1	26283773	136
Aaeg:AAEL003046-RA	supercont1.75	-1	2560975	Agam:ENSANGP00000021208	X	-1	23480625	Flyb:Sap-r-PB	3R	-1	26711080	461
Aaeg:AAEL003030-RA	supercont1.75	-1	2458002	Agam:ENSANGP00000021172	X	1	23500527	Flyb:CG12071-PB	3R	-1	26704518	461